| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4914 |
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| Symbol | |
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| ID | 4015951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007949 |
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| Strand | + |
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| Start bp | 4358 |
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| End bp | 9478 |
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| Gene Length | 5121 bp |
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| Protein Length | 1706 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637944556 |
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| Product | helicase |
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| Protein accession | YP_551688 |
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| Protein GI | 91790737 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG4646] DNA methylase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAATA CCCAAATTGC AAACAATGCC AAACAGGCTT CGGTCTGGTT GGACGGTTTC
AGCATCAATG ACTTCATGGC ACCGTCTGCA AAGACGGAGA TTGCAGAGGT CACCAGTGCA
GTAGCCACCG TTGTCTTTGA AATGGAAGCC AGCATCACTG CCGGCGCAAG TTTCACCTCT
GAGGAAGCAA ACGAGCAATC GTTTGGCATG GATGAAATCC AGGAATGGGT TTCCACATCC
AACAATCTGT CTGACTGGAC TGACCGCAAG GTTGCCTGGC CACTGATTGA TCCTGAAGAC
TATTCAGCGG AAGCATCGGC AGAAGCACGG ATCGCTGACA ACCTCATGGC TGTTAGATTG
CTCCGTGAGC TGCAGAGCAC CAGGCGGGAA GTCACTGATG AAGATCGCAC CACGCTGTTG
AAATACTGCG GATGGGGCGG GTTGGCCCGG CTGTTCACAC CAGACGGATC GAAACGTCAC
AGTCTGGCAG ACCAACGCGA CGAACTGGAA TCGCTCACAA GCGAAAAAGA GTTCACAGGG
ATGCGTTCTT CGATTACTTC GGCCTACTTC ACAGACCCGG CCGTGGTGAC AGCACTCTGG
CAAATTGTTC GGCACCTTGG ATTCCAGGGC GGCCGGATTC TGGAGCCAAC CGCTGGCGTT
GGCCACTTTC TCGCAGGCAT GCCCTCGGAA CTGGCCATGA AATCGGATGT GACTGCGGTT
GAACTGGACA CAATCAGTGC CGGAATGCTG GAGGCCTCGT TTGGCCCCCT CGGTGTTCAG
GTGCACGCAA GCGCGCTTGA AAAAGCCCGT TTGCCGGTTG CGTTCTATGA CCTGGTGATA
GGCAATGTTC CCTTTGGGGA CCATCGCAGC CTGGATACAA CTACGGCCGA CTATGCAAAT
TGGTCGATTC ACAATTGGGC GATCGGCAAG TCAGTCGACC TGGTTCGTCC GGGCGGATTG
ATCGTTCTGA TCACTTCACG TCACAGCCTC GACAGCAAAA CCGATAGCCA CCGCAAGTGG
TTGTCGGCGC ATGCTGAACT GGTCGGATCC TACCGTTTGC CGACAATGGC CTTTAAAAGC
CAGGCGAACA CGGAAGCCGT GACAGACATC CTAGTGCTCA AGCGTCGGGA AACACCTGAC
TACCGAGCCG GCGGATGGGT CGATCTGGGC AAAGCAACAC CAGAGATGAT CAAAGCGGGC
CAGGAACTGA CCACGGTCGG CCGCGCGTAT GGCAACCGTA TTGAGCGTGA CCGCTCGATC
AACAGCTACT ACGTGCGGAA TCCTGAAAAC GTGTTGGGCA GGTTGGTGTT TGAATCAACC
CAGTTCGGTG AGTCAATGAA CCCTGTGTTC AACGGCACTC CGGCTGATCT ACAGGAGCTG
CTGCAAAAGC GGATTGAGAG TCTCCCTGCC AACGTCTATA CGGCGAAGGC GGACGATTCG
ACGTCCACCA GCCGCACAGC AATGCAGCGC TACGAAATGG ATAACTACGT GGCGCCTGGA
TCGATGGTCG TGAAGGACGG ACGGATCTGT GTCTCTGAGG GCGATGAGCT CTTGGATATT
GATTCCCTGT ACACCGGAAC TGCGCGCAAG CGTGTTCTGG GAATGATCGA GGTGAAGAAG
CACGCTGAGG CTGTGATTGA GTTCCAGGCA AAGTCGCAAG ACGATGTGAA GCTGCAGCAG
TTGCAGACAG TGTTGAACGG CACCTATGAC GCCTACGTAG CGTCTATGGG GTATTTGAGC
ACCAGCGCGA ATTCAAGGCT GATGCGATCA GACCCTTCAT GGCCGTTGAT GTTGGCACTG
GAAATGTGGG ATGACGAAGA TCAGAAGGCC GTCAAGGCTG ACATATTCTT CAAACGTACC
GTCGGTCACC GCAAGGTTCC GGACCGGGTT GACAACGTCA AGGACGCAAT GTTGATCAGT
TTGGCGGAGT TCGGGAAGAT CGTTCTCAAG GATCTTGCAA CGCGCACTGG CATGCCGGTG
ATGCAGGTTG TGAAGGAATT GGGAGCACAG GCGATTGCAT TCCGTGACCC GGAGCTGGGT
CGTTGGGTGC CAGCGGATGA ATATCTGTCA GGGCATATCC GCGACAAGAT TGCAGCAGCG
AAAGCCGCTG GACCGGCCTA CGCTGAGAAC GTGCCGGCAC TGGAAGCCGT GCTGCCCAAG
GATCTAGGTC CTTCGGAAGT CGAAGCTCGG ATGGGTGCAC CGTGGATTCC GGTGGACGTG
ATTGAACAGT TCGCGTGTGA GCTGGTTACT GCCAAAGACG ATGCCATTAC GGTGGAGTTT
GAAGCGCAGT CTGCGACGTG GAGTGTGAAA CACACGGGCT GGAAGATTGA GTCGGTGGGC
GATCGGGTGT TGCAGACATC GCAATGGGGA ACGGCCAAGC GCTGCGCCCT AACGCTGGTG
GAAGCGGCCT TGAACCAGCA ACCGCCGAAC ATCACCTATG AAGTCGATGG CCGCCGCGTT
GTAGACCGGA TGGCAACATT GGCCGCCAGA GAGAAGTGGC AGGCAATTCG GGATCATTTC
CGAAAATGGG TCTACCAAGA TCCCGCCCGC CGGGACAGGT TGCTGCGCAT CTACAACGAT
GCCTTTAACC AGATCGTCAA TCGAAAGTTT GACGGTTCGC ATTTGATGCT GCCTGGGATG
TCGTCTGCGG TGGTGCCTTA CAGCCACCAG AAAGATGCCA TATGGCGTGT GGTGGTCAAT
GGGAATACCT TGCTGGCGCA TTGCGTTGGT GCGGGAAAGA CATTGGTCAT GTGCGCTGCG
TCGATGGAAC TCCGTCGATT GGGAAAAGCG GTGAAGCCGG TGCACGTGGT TCAGAATTCG
TGCCTCGACC AATATTCGGC CGAGTTTGTT CGTCTGTACC CGCAAGCTCG GGTGCTGATG
GCAAGCAAGG ACGATCTACA CGGTGATAAC CGCAGAACCT TTGCAGCGCG CGTAGCGACA
GGGGACTTTG ATGCTGTGGT CCTCACGCAG TCAACCTTCG AGAGATTGAT GCTGTCGCCA
GATGTTCAGC AAGAGTTCAT CCGCAAGATG CTTGCTGAAG CGCGTGTAGC GGAAAGTATG
GCCAGCGATA CAGGTGCAAA GCGGTCTCTT AAAGAGATCG AAAAGCGCAT GAAAGACTTG
GAAGCGCGAT TGGAACGGCT GGCAGCAGCC GGGAAGAAAG ATGCAGAGAA TGTGTGGTTC
GATGAACTGG GAATTGACTA TTCGTTCATT GACGAAAGTC ATTCGTACAA AAATTTGGCG
AGGATCTCAA AGATGCCCCG CATTGCCGGC CTGCCGAATG TTTCGTCACA ACGGGCGTTC
GACGTCTTCA TGAAGACGCG AGTCATCATG GAGAAGCATG GAGGCAGAGA GGAAGGCGTC
GTGATGGCGA CTGCTACGCC GATCAGCAAC AGCCTGGCTG AGCTGCACAC GTTTCAGGTT
TTCCTGCAGC CGAAGACGCT CAAGAAGTTC GGCTTGTACG AATTTGATGC ATGGAGCGCA
AGCTACGGCG AGAGCGTGAC AGGCATTGAG TTGGCACCTG ATGGTGGAGG ATATCGCCTG
AACACCAGGT ACAGCCGTTT TGTGAATCTA CCCGAGCTAA TGGGGATTTT TCGTGGGGTT
GCAGACATTC GCACCAAGCG GATGTTGAAT CTCCCAACTC CTCAGATCGA GGGCGGAAAA
GCACAGACCA TGGTTGCGAA ACCCAGCGAG GAATTGCTGG CTATCGTGGC GGGGCTGGTA
GAGCGCGCCG AGAAGATTCG CGCGGGATCA GTTAGACCAG ATGAAGACAA CATGCTCAGC
GTTACCAATG ACGGCCGCAA GGCGGCATTG GATGTTCGGC TCTTGGACGG CTTCTTGCCG
TTCGATCCAA CAGGGAAGCT TGCGCTGGCT GCTGACAACA TGGTGCGCGT TTGGAAACAG
GCGCATGCCA TCAAGGGAAC GCAGATGGTG TTTTCCGATC TGGGAACACC GAACAGCAAG
AACTTCAATG TCTACGATGA GGTCAGACGA CTTCTGATTG ACAAAGGGGT TCCATCCGAG
GAAATCGAGT TCATTCACGA CCACGGCAGC GACAAGGCGA AAGCCAAGTT GTTCAAGCGG
GTAAGGGATG GCTCGGTGCG GTTCCTGTTG GGCTCTACGT CCAAGATGGG GACTGGCACC
AACGTGCAGA AGCGCTTGAA GGCAGTCCAC CAGCTGGATG CCCCATGGGT GCCATCTGCA
GTGGAACAGC GTGACGGCCG TGCGGATCGT CAGGGCAACC TGAACGAAAC AATCGAGTTA
TGGCGCTATG TCACAGAAAA AAGCTTTGAC GCCTACAGCT GGAACCTGCT GACAGTCAAG
GCCAACTTCA TCGAACAGGT GATGACGGCC GAGGCTGGAC TGCGGACCGT AGAGGATATT
TCGATGTCAG CGTTGAGCTA CGCGGAGATC AAGGCAATCG CCAGTGGTAA CCCACTGGTG
ATGGAGAAAG CCACGATTGA CGCTGATGTG CAGAAGTTTT CGCTTCTGCG ATCGCAATGG
GAAGATGAGC GTTGGGCCCT GGGCCGTCGC GAGTCGAACC TTGTGAGCCG CTTGGCGTAC
ATCGATAAGA ACATGGCCAG CATGGAGGTG GAGGCAAAGC TCGCTGAAAA GGCACTTGCT
TCAAACCTTG TGTTTGAGCC TGCGACATCG ATCGGTGATA AGGCAGTTGA TTCGCTGGGC
AATGGTGCTC AAGGATTGGC AGGATCCTTC AGGGCGCACT CCCACAGGGG GTCAACTGGA
GGTGAGGCAG TGGTGCTCGG AAAGTTTGGC GGTTTTACCG TCCAATACTC GAAGGTCCTC
GCTGATCCTA ACCTGTACTT GGTGGGACCG ATTTCAGGCG CAGCGATGCG TGTGGATCGG
CCGCATATCA ATGACCTGGA AGGGGTGGGT CTGGCAGTTG TCAGCACTCT CGAACGGATT
GTTGAAACAC CAGGTGTGCT GCGAAATGAG TATGGCGAAA GGTCGAATGA ACTTGCCACG
ACACGCAGAC TGATGGTCCA GGATTTTGAT CACGCGGGAA AGTTGGATGC TTTGCTCCAG
CGTCAACGTG AGATTGAATC TGAGCTGGAC CTTGATAAGG ACGCAGAGGG ATGCCAGAAC
ATGGCTACTG AAGCGGTTTA A
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| Protein sequence | MGNTQIANNA KQASVWLDGF SINDFMAPSA KTEIAEVTSA VATVVFEMEA SITAGASFTS
EEANEQSFGM DEIQEWVSTS NNLSDWTDRK VAWPLIDPED YSAEASAEAR IADNLMAVRL
LRELQSTRRE VTDEDRTTLL KYCGWGGLAR LFTPDGSKRH SLADQRDELE SLTSEKEFTG
MRSSITSAYF TDPAVVTALW QIVRHLGFQG GRILEPTAGV GHFLAGMPSE LAMKSDVTAV
ELDTISAGML EASFGPLGVQ VHASALEKAR LPVAFYDLVI GNVPFGDHRS LDTTTADYAN
WSIHNWAIGK SVDLVRPGGL IVLITSRHSL DSKTDSHRKW LSAHAELVGS YRLPTMAFKS
QANTEAVTDI LVLKRRETPD YRAGGWVDLG KATPEMIKAG QELTTVGRAY GNRIERDRSI
NSYYVRNPEN VLGRLVFEST QFGESMNPVF NGTPADLQEL LQKRIESLPA NVYTAKADDS
TSTSRTAMQR YEMDNYVAPG SMVVKDGRIC VSEGDELLDI DSLYTGTARK RVLGMIEVKK
HAEAVIEFQA KSQDDVKLQQ LQTVLNGTYD AYVASMGYLS TSANSRLMRS DPSWPLMLAL
EMWDDEDQKA VKADIFFKRT VGHRKVPDRV DNVKDAMLIS LAEFGKIVLK DLATRTGMPV
MQVVKELGAQ AIAFRDPELG RWVPADEYLS GHIRDKIAAA KAAGPAYAEN VPALEAVLPK
DLGPSEVEAR MGAPWIPVDV IEQFACELVT AKDDAITVEF EAQSATWSVK HTGWKIESVG
DRVLQTSQWG TAKRCALTLV EAALNQQPPN ITYEVDGRRV VDRMATLAAR EKWQAIRDHF
RKWVYQDPAR RDRLLRIYND AFNQIVNRKF DGSHLMLPGM SSAVVPYSHQ KDAIWRVVVN
GNTLLAHCVG AGKTLVMCAA SMELRRLGKA VKPVHVVQNS CLDQYSAEFV RLYPQARVLM
ASKDDLHGDN RRTFAARVAT GDFDAVVLTQ STFERLMLSP DVQQEFIRKM LAEARVAESM
ASDTGAKRSL KEIEKRMKDL EARLERLAAA GKKDAENVWF DELGIDYSFI DESHSYKNLA
RISKMPRIAG LPNVSSQRAF DVFMKTRVIM EKHGGREEGV VMATATPISN SLAELHTFQV
FLQPKTLKKF GLYEFDAWSA SYGESVTGIE LAPDGGGYRL NTRYSRFVNL PELMGIFRGV
ADIRTKRMLN LPTPQIEGGK AQTMVAKPSE ELLAIVAGLV ERAEKIRAGS VRPDEDNMLS
VTNDGRKAAL DVRLLDGFLP FDPTGKLALA ADNMVRVWKQ AHAIKGTQMV FSDLGTPNSK
NFNVYDEVRR LLIDKGVPSE EIEFIHDHGS DKAKAKLFKR VRDGSVRFLL GSTSKMGTGT
NVQKRLKAVH QLDAPWVPSA VEQRDGRADR QGNLNETIEL WRYVTEKSFD AYSWNLLTVK
ANFIEQVMTA EAGLRTVEDI SMSALSYAEI KAIASGNPLV MEKATIDADV QKFSLLRSQW
EDERWALGRR ESNLVSRLAY IDKNMASMEV EAKLAEKALA SNLVFEPATS IGDKAVDSLG
NGAQGLAGSF RAHSHRGSTG GEAVVLGKFG GFTVQYSKVL ADPNLYLVGP ISGAAMRVDR
PHINDLEGVG LAVVSTLERI VETPGVLRNE YGERSNELAT TRRLMVQDFD HAGKLDALLQ
RQREIESELD LDKDAEGCQN MATEAV
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