Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4580 |
Symbol | |
ID | 4012738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4850311 |
End bp | 4851258 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637944229 |
Product | LysR family transcriptional regulator |
Protein accession | YP_551361 |
Protein GI | 91790409 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.490701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAAC TCAAGCGCAT GGCCATCTTT GCCGAAGTCG TGGCGGCAGG CTCCCTGACT GCGGCGGCGC GGCAACTGGG CATGACGCCC TCGGCGGTGA GCCAGCATTT GCGCCAGCTG GAACAGGCGC TGGGGCTGGC GCTGCTGCAC CGCTCCACCC GGCGGCTCAC CCTGACCGAG GCGGGCGAGC GCTACCACGC AGGCTGCGCC GCGATGGTGG CGGCGGCGCG CTCGGCCGAG CAGGCCCTGG CGCGCCTGCG CGATGAGCCC GAAGGCGAAT TGCGGCTGGC CGCGCCCGCC GGCTTTGGCA GCGTCCTGGC CACCGCGCTG GCGCCGCTGC GGGGCTACCC CAGGCTCACG CTGCGCCTGC TGCTCGATGA CGCACTGATT GACCTGATCG GGGAGCGCGT GGATATCGCG CTTCGCATTG GCGTGCTGGC CGATTCAGGC CTGGTGGCGC GCAAGCTGGG CAGCATGGCG CGCCAGCTGT GTGCGTCGCC GGCCTACCTG GCCGAGCGCG GCTGGCCTGC GCAGCCGCGT GATCTGCTGC AGCATGACTG GCTCGGCAGC AAACCGGCCA ACGCCGGCGC CGACATGCTG GAGCTGCAAG GACCTGCCGG CGAACGCGAG ACGCTGCGGC TCGAGGGCCG GGTGCAGGCT TCCCAGGTGA CGGCCCTGCA CGCGTTGTGT GTGGCGGGCT GGGGCATCAG CCTGGGCGTG AGCGACGACG ACCAGAAAGC GCTGGCGGAC GGGCGCCTGT TGCCGGTGCT GCCCGGCTGG CGTCTGGCTG ACTTGCCGGT GTATGCGGTG ACCCCGCGGC GCGGTGAGCA GCCGGCCAAG GTGCGCCATG CGCTGGACGT GCTGGCACTG TACTTCGGCG ACGCGGGCGA CGCGGGCGAC GCGGGCGGCG CGGCTGCGGC GCACACTGCC ACTGCCTTTC ACTCCTGA
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Protein sequence | MDQLKRMAIF AEVVAAGSLT AAARQLGMTP SAVSQHLRQL EQALGLALLH RSTRRLTLTE AGERYHAGCA AMVAAARSAE QALARLRDEP EGELRLAAPA GFGSVLATAL APLRGYPRLT LRLLLDDALI DLIGERVDIA LRIGVLADSG LVARKLGSMA RQLCASPAYL AERGWPAQPR DLLQHDWLGS KPANAGADML ELQGPAGERE TLRLEGRVQA SQVTALHALC VAGWGISLGV SDDDQKALAD GRLLPVLPGW RLADLPVYAV TPRRGEQPAK VRHALDVLAL YFGDAGDAGD AGGAAAAHTA TAFHS
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