| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4512 |
|---|
| Symbol | |
|---|
| ID | 4012826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4766907 |
|---|
| End bp | 4767824 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637944164 |
|---|
| Product | gluconolactonase |
|---|
| Protein accession | YP_551296 |
|---|
| Protein GI | 91790344 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00932463 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.660783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGAACT TGTCCTTCAC GCCTCCCGAA CTCATTGAAG CCCGCGTGCT GACGCGCCTG
CCCGACGTGC TGCGCCGGCC GCAACGCAGC GACTGGTCCG ATGCCAACAA GCCCGGCCAC
ATCGTTGACT GCTTTCTCGA AGGCCCGTCC TTCGATCGCG CCGGCAACCT GTATGTGACC
GACATTCCGC ATGGCCGCAT CTTTCGTATC GATCCCGCGC TGGAGTGGCA GTTGGTCGCC
GAGTACGACG GTTGGCCCAA TGGCACCGCG CTGCATGCAG ACGGCTCGCT GTGGATTGCC
GATTACCGCT GCGGCCTGCT GCGGCTGGAT CCGTCCACCG GGCAGGTCAG CACCGTGCTG
GGCCACCGCA ACAGCGAGTC CTTCAAGGGC GTGAATGATC TGACCTTCGA CGCGCAGGGT
CACTGCTACT TCACCGATCA GGGGCAGAGC GGACTGCATG ACCCCACTGG GCGCGTCTAC
CGGCTGCGCG ACAACGGCCA GCTCGACCTG CTGTTGAACA ATGCGCCCAG CCCCAACGGA
ATTGCCTTGA GCCCTGATGG CCGGGTCTTG TTTGTCGCCG TGACACGCGG CAACGCGGTG
TGGCGCGCCC CGCTGCTGCC CGACGGTTCC CTGTCGAAAA TGGGGGCGTT CCAGACTTTC
TTTGGCACCA GCGGTCCGGA CGGGATGGCG GTCGATGTCG AGGGACGGCT GGTCGTGGCG
CATGCCAGCC TGGGCGGCGC CTTTGTGCTT AACGCCCGCG GCGAGGTCAC CCATTTCGTG
CGCAGCCCGA CCGGCAGCAC GGTGACCAAT CTGGCCTATC GCCCCGGGAC CCACCAGATC
GTGATGACCG AGTCGGCCAC CGGCACGCTG CTGATGGCGG ATTTGCCGGC GTCGGGAGCG
CCTTTGTATT CAGGGTGA
|
|---|
| Protein sequence | MWNLSFTPPE LIEARVLTRL PDVLRRPQRS DWSDANKPGH IVDCFLEGPS FDRAGNLYVT
DIPHGRIFRI DPALEWQLVA EYDGWPNGTA LHADGSLWIA DYRCGLLRLD PSTGQVSTVL
GHRNSESFKG VNDLTFDAQG HCYFTDQGQS GLHDPTGRVY RLRDNGQLDL LLNNAPSPNG
IALSPDGRVL FVAVTRGNAV WRAPLLPDGS LSKMGAFQTF FGTSGPDGMA VDVEGRLVVA
HASLGGAFVL NARGEVTHFV RSPTGSTVTN LAYRPGTHQI VMTESATGTL LMADLPASGA
PLYSG
|
|---|
| |