Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4280 |
Symbol | |
ID | 4013043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4513080 |
End bp | 4514072 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637943932 |
Product | auxin efflux carrier |
Protein accession | YP_551070 |
Protein GI | 91790118 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.182755 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGGCT GGCCGGTGAC AATACGCCCT GTGTTAAGCA TTCTTCTGGT CACCTTTCCC TTCTTTGCCC TGGTGCTGTG CGGCTATGCC GCCGCCCGCC GCGCACTGCT GCCGCAGCTC GCGATTCCGG GGCTCAACAC CTTTGTGCTG TATTTCGCGC TGCCATGCAT GCTGTACCGC TTTGGCGCGA GCACGCCGGT TGCCCAGCTG CTCGATGCCA GCCTGGTCGC CGTGTACCTG CTGTGCGCGC TGCTGCTGGT GACGTTCACG ATTGCGGTCA CACGGGACCG TCCCAAGGGC CGTATCGGAT GGAACGATGC CTCTTTCGGC GCGCTGGTGG CCACTTTCCC CAACACCGGA TTCATGGGCG TGCCGCTGCT GGTGGCGCTG CTCGGCGTCA AGGCGGCCGG CCCGGCGATC GTGACCATCG TGGTGGACCT GCTGGTCACC AGCTCGCTGT GCATTGCGCT GTCGCGGCTG GACTCGGCCG ATATCCACGG CGCTGAGGTG GCCGCCCAAA AAGCGTTGCG CGGCGTGGCG CTCAATCCGA TGCCATGGGC CATTGTGCTG GGCGCCCTGT CGTCGGGCTT CGGGCTCAGC CTGCCCGCGC CGGTGATGCA GACACTGGGG CTGCTGGCCG ATGCCGCCTC GCCGGTGGCA CTGTTCACCA TCGGTGCCGT GCTGGCGCGC TCCCAGATGA ACACCGCGGA GTCCGTGCCT TTGCGAGACT ATGTGCCGGT GGCGCTCATC AAGCTGGTGA TCCATCCGGT GCTGGTCGGG CTGATCGGCT TCGGGGCGAT TGCCGCCGGC CTGCCGCTGG ACCGCTTCGC CCTGACCGTG GTGATCCTGG TGGCCGCCCT GCCCAGTGCC AGCAATGTCG CCCTGCTGGC CGAGCGTTTC GGCGCCGACA ACGGGCGCAT TGCGCGGATC ATTCTGCTGT CGACGGTGCT GGCGTTTTTC AGCTTCTCGG CGGCGGTGAG TTTGTTGACC TGA
|
Protein sequence | MPGWPVTIRP VLSILLVTFP FFALVLCGYA AARRALLPQL AIPGLNTFVL YFALPCMLYR FGASTPVAQL LDASLVAVYL LCALLLVTFT IAVTRDRPKG RIGWNDASFG ALVATFPNTG FMGVPLLVAL LGVKAAGPAI VTIVVDLLVT SSLCIALSRL DSADIHGAEV AAQKALRGVA LNPMPWAIVL GALSSGFGLS LPAPVMQTLG LLADAASPVA LFTIGAVLAR SQMNTAESVP LRDYVPVALI KLVIHPVLVG LIGFGAIAAG LPLDRFALTV VILVAALPSA SNVALLAERF GADNGRIARI ILLSTVLAFF SFSAAVSLLT
|
| |