| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_4196 |
|---|
| Symbol | |
|---|
| ID | 4013138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4410722 |
|---|
| End bp | 4411369 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637943843 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_550986 |
|---|
| Protein GI | 91790034 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTG AACCCAAATC CTTCGAAGAT GCCATCACGG CGACGGACTT CTCCAGTGAA
GATTACTGTG GCACGAGCTA TGCGGCCAAG CTGCTCGGTC TGTCGGTCGC CACCGTGCAG
TCGCTGGTGG AAAAAGGGGA AATTGACGCC TGGAAGACCC TGGGCGGCCA CCGCCGGATT
GCCCTGCAGT CCATCAATGC CTACCTGGCC AAGAACAATC CGCAAGTCGC CAAGGTAGTC
GACACCGATC CGAAACACCG TTTGCGCGTG CTGCTGGTCG AGGACGACGA GGCCACCCGG
GAGCTGTACC AGCTCCAGTT TGAGGACTGG GACCTGCCGG TCGATTGCAC CTGGATGCCT
TCGGCGCTGG AGGCCTTGAT GGACATTGCC AGCATGCGTC CGGATTTGCT GATCACCGAC
CTGTCCATGC CTGGCGTTGA TGGCATCGAA ATGCTCAAGG CCCTCAAGCG CAATCAGCAG
TTGGCGGACA TGCAGATTAT TGTGATCAGT GGCTTGCCGC CGGAGGCCAT CGAAGAGCGG
GGCGGTCTTC CGCCGGATGC CCACCGGTTG CAGAAACCGG TGAATTTCGA CTGGCTGCAC
GGGTATGTCA CGGCACTGGT GACGGCCAAC CGCAAGTGGC ACCACTAA
|
|---|
| Protein sequence | MPREPKSFED AITATDFSSE DYCGTSYAAK LLGLSVATVQ SLVEKGEIDA WKTLGGHRRI
ALQSINAYLA KNNPQVAKVV DTDPKHRLRV LLVEDDEATR ELYQLQFEDW DLPVDCTWMP
SALEALMDIA SMRPDLLITD LSMPGVDGIE MLKALKRNQQ LADMQIIVIS GLPPEAIEER
GGLPPDAHRL QKPVNFDWLH GYVTALVTAN RKWHH
|
|---|
| |