Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4140 |
Symbol | |
ID | 4013195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4352091 |
End bp | 4353203 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637943787 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_550930 |
Protein GI | 91789978 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.544868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGAATTTATG GTGCGGCGCC ATCGTGCTGA TGGCCTTGGG TCACGCCAGC CAGGCGCAAA TCCTGATCGG ACAGACCGCC GGGTTTACCG GCGCGGTGGG CGCAGGTGTC AAGGAAACCA CAGAAGGCGC CAAGCTTTAC ATTGACACCA TCAACGCCAA GGGCGGTGTC AACGGCCAGA AGATTGAGCT GGTCTCGCTC GACGACAAGT TCGACCCCAA GCTGGCGGCC GAAAACGCGC GCAAGCTGAT AGAAGAGCAG AACGTGGTGG CAATGTTCCT GACGCGCGGC ACGCCCCACA CGGAAGGCAT CATTCCCATC CTTGAAAAAA ATGGCGTGCC GCTGATAGGC CCGTCCACCG GTGCCATGGT GCTGCACCAG CCCGTCAAGA AGCATGTCTT CAATGTGCGC GCCACCTACC AGCGCGAAGC CGAAAAGGCC ATCACCCATC TGCATTCCAT GGGCATCACG CGGATCGGCA TTGTCTACGC GGACGACAGC TTCGGCGCCG ATGGCGTGGC CGGCGCGCAA AAAGGCCTGA CGACGGCCAA GCTGCAGCCC GTTGTGCTGG AAAAATTCAA CCGCGCCAAG CCCGACTTCG GGCCGATTGC TCCCAAGGTT TTTCAGTCCA ATGCGCAGGC CATCATGATG GTGGCCTCCG GCCAGGCGGT GGTGGATGGC GTCAAGGCCT TCCGCGCGGC GGGCTCTGCG GCACAGATTG TGACGCTGTC CAACAATGCC TCCAGCGGTT TTGTGAAGAG CCTGGGCGAG AACGCGCGGG GCGTGATCGT CACGCAGGTC TTTCCCTACG AGCGCTCCAT TGCCTTCCCC ATGGTCAGGG AAGCCCAGGA AATGGCCAAG GCGAAGGGAC AGGGCGAAAT CACTCCGGCC ATGCTGGAGG GCTTTGCCGC GGCCAAGGTG CTGGTGGAAG GCCTGCGCCG GGCCGGCGCC AAACCCACCC GCGAAAAAAT CCAGGCAGCC CTGGAAGGTC TTCGCAAACT GGATATTGGC GGACTGGAAG TGAACTACAG CGCAGAGGAC CACACCGGGC TTGATTTCGC CGATCTGTCC ATCATCGGGA CCGACGGGAA ATTCAAGCGC TGA
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Protein sequence | MKKLNLWCGA IVLMALGHAS QAQILIGQTA GFTGAVGAGV KETTEGAKLY IDTINAKGGV NGQKIELVSL DDKFDPKLAA ENARKLIEEQ NVVAMFLTRG TPHTEGIIPI LEKNGVPLIG PSTGAMVLHQ PVKKHVFNVR ATYQREAEKA ITHLHSMGIT RIGIVYADDS FGADGVAGAQ KGLTTAKLQP VVLEKFNRAK PDFGPIAPKV FQSNAQAIMM VASGQAVVDG VKAFRAAGSA AQIVTLSNNA SSGFVKSLGE NARGVIVTQV FPYERSIAFP MVREAQEMAK AKGQGEITPA MLEGFAAAKV LVEGLRRAGA KPTREKIQAA LEGLRKLDIG GLEVNYSAED HTGLDFADLS IIGTDGKFKR
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