Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_4046 |
Symbol | |
ID | 4013296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 4247037 |
End bp | 4248341 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637943694 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_550837 |
Protein GI | 91789885 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.421947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAAAG CTCGCGTCCC GCCATGGCTT TCCCGGCATC TTATTGCGCA CGGGGTGCCC TCGCCCCTGG AGCCGATTCT GCACCCATCG CCGTGGCGGC TGCGCCTGAT CGGCCTGTCA CTGCTGCTCG GCAACCCGCT GTTTGGCTGG ATCTGGTCCA GCTGGCTGGT CCAGCCCTAC GAGAGTCCCT GGCTGCGCGG TTTGATGAGC GCGCTGGGCG GGGTCCTGAT GCTCCCGCCG GTGATCAGCG ATCTTTCCAG TCCGGTCACG CGCGTGATCG TTCCGGTGAT CACCTGGATT GAACTTCCCT TCTTCTTCAG CTGGATGTAC CTCAACAATG CCGGCGGCGC GGCCTGGCTG TCGAGCATGT GCGCGATGAT TCTGATTTAT TACCACCTGA CCGACTGGCG AATCGCGACG GCGGGAACCG TCAGCGGCGC GCTGGTGGCC TGGGGCCTGC TCAACTGGCT GCCCCACCAG AGCGTTCCCC TCGCCGGCCT CGCCAACCTC GCCAACCTCG GCGCCGTTGA TGCCGTGGTG ATCGCCTTCA GCTGGGGCTG CGCCATATTG CTCGGGCTGT CGTCGGCCAA CCTGCGACGT GAACATCTGG CCCACACACT GACCACCATT GGCATCATGG CGCATGAGCT GCGCACGCCG CTTTCGACAG CGGCGCTGAT CGGGGACGCG ATCCAGCTGG AGATCGAGCG CCAGCCAGAT CTCCCAAGAG CCCAGCAATT CGAAAAACTG GCCGTGCGCC TGCATGGCCT GGTGCGTCAC ATGAACCACC AGATCGACAC CCAGATCGCC AACGCCAAGC TGCTGCAGCT GCCACGCTAC GACCAGCGCA TTCTGGCCAG CAAGCTGGTC AACGAGGTCA CCAGCAACTA CCCCTTTCAG TCCACACGCC AGCGGGAATG CGTGCAGGTA CTGATACGCA CCGACTTCGT ATTCCGCGCT TCCTTCACGC AGTTTTCCCA GGTGCTCGAC AACATGATCA AGAATGCGCT GCACTCCCTG ATGGCGGCCG ACTCCAAATA CCCCCTTGGC GCGCTGCGCA TCGAGGTCGG CGTGGCGCGC AACCGCGGCC GTATCGTGGT GGCCGACGAT GGCATGGGCA TTGACCCCGC CTTGCAGGCG AAGATATTCA AGCCTTTTTT CTCCAGCAAC CGCGGCACCG GCCATGGCCT TGGACTGGCT TTTTGCCAAC AGGTGGTGCA AAGTGCAGGC GGCAGGATTC AGGTGAAATC AGAGTTTGCC GTCGGCGCGA TTTTTACCAT TGACTTACCG CTGGCAGGCA GCTGA
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Protein sequence | MRKARVPPWL SRHLIAHGVP SPLEPILHPS PWRLRLIGLS LLLGNPLFGW IWSSWLVQPY ESPWLRGLMS ALGGVLMLPP VISDLSSPVT RVIVPVITWI ELPFFFSWMY LNNAGGAAWL SSMCAMILIY YHLTDWRIAT AGTVSGALVA WGLLNWLPHQ SVPLAGLANL ANLGAVDAVV IAFSWGCAIL LGLSSANLRR EHLAHTLTTI GIMAHELRTP LSTAALIGDA IQLEIERQPD LPRAQQFEKL AVRLHGLVRH MNHQIDTQIA NAKLLQLPRY DQRILASKLV NEVTSNYPFQ STRQRECVQV LIRTDFVFRA SFTQFSQVLD NMIKNALHSL MAADSKYPLG ALRIEVGVAR NRGRIVVADD GMGIDPALQA KIFKPFFSSN RGTGHGLGLA FCQQVVQSAG GRIQVKSEFA VGAIFTIDLP LAGS
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