| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3986 |
|---|
| Symbol | |
|---|
| ID | 4013353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4179508 |
|---|
| End bp | 4180470 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637943635 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_550778 |
|---|
| Protein GI | 91789826 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGC TGGTGACGGG AGCGAACGGC TTTGTGGGCG GTGCGGTCTG GCGCAGGCTC
CATGGCATGC GTGATGTCCA GGCAGTGGGC TGTGTGCGCC GGGCGGTTGC GTTCGCGGAG
GTGGATGCAT TGGTAGCAAG CGTGGGCGAC CTGTCTGTAT CGACCGATTG GTCATCGGCC
CTGTCCGGCG TCGAGGTGGT TGTTCACGCT GCGGCCCGGG TGCATGTGAT GCAAGACGCT
GCCACCGATC CGCTGGAGGA GTTTCGCCGC GTCAATGTGC TGGGTACCTT GCAGCTGGCA
AGGCAGGCGG CGGCCGCTGG TGTGCGACGG TTTGTGTTCA TCAGTTCCAT CAAGGTCAAT
GGCGAGGCGA CTCAGCCGGG CCATCCGTTC ACGGCAGACG ATGCGCCCGC TCCGCTGGAT
GCTTACGGTA TTTCCAAAAT GGAGGCCGAG CAGGGGCTGC GCGAACTGGC CGCGCAAACC
GGATTGGAGC TTGTCATCAT TCGCCCGCCG CTGGTGTACG GCCCGGGGGT GAAGGCCAAT
TTCCAGGCCA TGATGCGCTG GCTGGCGCGC GGCATGCCTT TGCCGTTGGG CGCCATTCAC
AACCTGCGCA GTCTGGTGGC CCTGGACAAT CTGGTGGATT TGATCGTGAC TTGCCTCAAT
CACCCGGCCG CCGCAAATCA GACGTTTTTG GTGTCCGACG GTGAAGACCT GTCGACCTCG
CAATTGCTGC GGCGCATGGG GCAGGCCCTG GGCAAGCCGG CACGCCTGAT CCCCGTTCCG
TCTGCGCTGC TCAAGCTCGG TGCGGCTTCG GTGGGCAAGC CGGCTGTGGC GCAGCGCTTG
TGCGGGTCTT TGCAGGTCGA CATCTCCAAA ACACGGCAGT TGCTGGGGTG GCGTCCGCCG
GTGTCAGTTG ATGCGGGGCT GAAAAAAGCC GCGGAGGGCT ATTTGCGTGA AGCGTCTGTT
TGA
|
|---|
| Protein sequence | MKVLVTGANG FVGGAVWRRL HGMRDVQAVG CVRRAVAFAE VDALVASVGD LSVSTDWSSA
LSGVEVVVHA AARVHVMQDA ATDPLEEFRR VNVLGTLQLA RQAAAAGVRR FVFISSIKVN
GEATQPGHPF TADDAPAPLD AYGISKMEAE QGLRELAAQT GLELVIIRPP LVYGPGVKAN
FQAMMRWLAR GMPLPLGAIH NLRSLVALDN LVDLIVTCLN HPAAANQTFL VSDGEDLSTS
QLLRRMGQAL GKPARLIPVP SALLKLGAAS VGKPAVAQRL CGSLQVDISK TRQLLGWRPP
VSVDAGLKKA AEGYLREASV
|
|---|
| |