| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3972 |
|---|
| Symbol | |
|---|
| ID | 4013378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 4165555 |
|---|
| End bp | 4166616 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637943621 |
|---|
| Product | malate/L-lactate dehydrogenase |
|---|
| Protein accession | YP_550764 |
|---|
| Protein GI | 91789812 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.901224 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAG CCCAACGCCA CACCCCCGCC GACCTGACCC GATTTGCCAG CCAGTTGCTC
ACAGCCGCTG GCCTGCCCGC CGCCAAGGCA GACACCGTGG CCCGCCTGCT GGTGCTGACC
GACATGATGC AGCGCCACAC CCACGGCGTG GCGCTGTGCC CGCTCTATAT CGATCAATTG
AAAAACGGGC TGATGGGCAC AGACGGTGAG CCCGAAGTGG TGCGGGACAC GGGAGCCACC
GTGGTGTGGG ACGGCCATTA CCTGCCCGGC CTGTGGCTGG TTGACAAGGC CTTGAGCCTG
GCGTTCGAGC GTGTCGCCCA GCACGGCGTC GTGACCTTCG CCATGCGCCG CAGCCACCAC
ATCGCCTGCC TGGCCGCGCT GGTCAAACAG GCCACCGACC GGGGCCTGGT GGCCATCCTC
GCCACGTCCG ATCCGGGTGG CAAGTTTGTC GCGCCTTTCG GCGGACGTGA CCCGGTGTTG
ACGCCCAACC CGTTTGCCAT CGGCTACCCC GGCAGCAAGG CACCCGTGCT GGTGGACATC
TGCGCCTCCA TCACCACGGT CTCCATGGCC CGCACCAAGG CCGCAGCCGG CGTGCAGTTC
GAACACCCCT GGCTGATGGA CAACGCCGGC CAGCCGACCA CCGATCCGCG TGTGCTGGAG
CAGACCACGC CGCGCGGCTC CCTGCTGCTG CTCGGCGGTG CGGAATACGG CCACAAGGGT
TTTGGCCTGG CCCTGATGGT CGAAGCCCTG ACCCAGGGGC TGGCCGGCCA CGGCCGCATT
GATGCCCCCA ACCGCTGGGG CGCCAACGTG TTTCTGCAGG TCATGGACCC GGAGGCCTTT
GCCGGCCGCG ACAACTTCCT CACCCAGATG GATTTCATTG GCGACGCCTG CCGCGCCAGC
ACGCCGGTCC AGCCCGACGG CCTGGTGCGT TTGCCGGGCG ACCAGGCCAG CGGCAATATC
GCGCGCGCGC AGCAACAGGG CATTGCCCTG AGTGACGCCA CGCTGGACAA ACTCGCGGCC
TGCGCGACCC AATTGGGCGT TGCACCACTC GGCAACGCAT GA
|
|---|
| Protein sequence | MTTAQRHTPA DLTRFASQLL TAAGLPAAKA DTVARLLVLT DMMQRHTHGV ALCPLYIDQL
KNGLMGTDGE PEVVRDTGAT VVWDGHYLPG LWLVDKALSL AFERVAQHGV VTFAMRRSHH
IACLAALVKQ ATDRGLVAIL ATSDPGGKFV APFGGRDPVL TPNPFAIGYP GSKAPVLVDI
CASITTVSMA RTKAAAGVQF EHPWLMDNAG QPTTDPRVLE QTTPRGSLLL LGGAEYGHKG
FGLALMVEAL TQGLAGHGRI DAPNRWGANV FLQVMDPEAF AGRDNFLTQM DFIGDACRAS
TPVQPDGLVR LPGDQASGNI ARAQQQGIAL SDATLDKLAA CATQLGVAPL GNA
|
|---|
| |