Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3941 |
Symbol | |
ID | 4013386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 4130909 |
End bp | 4131976 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637943590 |
Product | extracellular solute-binding protein |
Protein accession | YP_550733 |
Protein GI | 91789781 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.949647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC CCTCACGTTT CCCGTCCGCC CGCGCCACCG CGGTGTCCCT GGCCGTTGCG GCCGCCAGCC TGTCTGCCGG CCTGGCCATG GCGCAAACCA AAACGCTGTA CATCGGCATG AACGGCGGCA CGATGGAGAA AACCTACACC GGCCATGTGT TCGGCGCTTT CGAGAAAGCC AACAACGTCA AGGTCGTGGT GGTGCCCGGC ACCTCGTCAG ACATCCTGGC CAAGGCGCAA GCCAATAAAG ACAACCCGCA AATGCACGTG ATGTTCCTCG ACGACGGCAT CATGTACCGC GCCATCGGCA TGGGCCTGTG CGAGAAGATG CAGCCCAGCC CGGCGCTCAA TGACCTCTTC CCCACGGCCC GCTTCAAGGG CGACATGGCC GCCGGCGTCA ACGTCGGCAT GACAGGTCTG GCCTACAACA AGAAGATGTT CACCGAAAAA GGTTGGGCTC CGCCCACCTC CTGGATGGAC CTGGCCGACC CCAAGTTCAA GGGCAAGGTC GTGTTCCAGT CGCTGTCGTC TTCCACCTTC GGCCTGCACG GCTTCCTGCT GTTTAACCGC ATCCAGGGCG GCACCGACAA GAACGTCGAG CCCGGCTTCA AGGCCTGGCC CACCACCATT GGCCCCAATG TGCTCGAGTA CATCCCCAGC TCGGCCAAGC TCGCCGAGAT GGTGCAAACC GGCGAGGCCG CCATGTTCCC GCTGACGCCC ACCGCCGTCG GTGTGCTCAA AGACAAGGGC CTGCCGGTCG AGTACGTACA GCCCAAGGAA GGCTCCGCCG TGCTCACCGT GGGCGAGTGC GTGATCGCCA AGAACAGCGA GCCCGCACTG GCCCACAAGC TGGCCCAGTA CCTGCTGTCA CCCGAAGCGC AAGCCGCCGC ACTTGAGCAC GGCGACCAGA TTCCGTCCAA CCCCAAAACC AAGGCCTCAG GCACCGCCGC CGCGCTGGTC AAGCAGATGA ACGACTACAT GAAGACGGCA GTCACGGTCG ACTGGGACGC CATCAACGAA AACCGCCCGG CGTGGAATGC GCGGTGGAAC AAGACGGTTG AGCGTTGA
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Protein sequence | MKLPSRFPSA RATAVSLAVA AASLSAGLAM AQTKTLYIGM NGGTMEKTYT GHVFGAFEKA NNVKVVVVPG TSSDILAKAQ ANKDNPQMHV MFLDDGIMYR AIGMGLCEKM QPSPALNDLF PTARFKGDMA AGVNVGMTGL AYNKKMFTEK GWAPPTSWMD LADPKFKGKV VFQSLSSSTF GLHGFLLFNR IQGGTDKNVE PGFKAWPTTI GPNVLEYIPS SAKLAEMVQT GEAAMFPLTP TAVGVLKDKG LPVEYVQPKE GSAVLTVGEC VIAKNSEPAL AHKLAQYLLS PEAQAAALEH GDQIPSNPKT KASGTAAALV KQMNDYMKTA VTVDWDAINE NRPAWNARWN KTVER
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