| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3679 |
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| Symbol | |
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| ID | 4013668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3891195 |
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| End bp | 3892214 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637943334 |
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| Product | porin |
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| Protein accession | YP_550478 |
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| Protein GI | 91789526 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0438317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CCCTGATCGC CATTGCGGCG ATGGCTGCGG TCGGCTGTGC ATCGGCCCAG
TCTTCCGTGA CGCTGTTTGG CGTCCTTGAC GTGGGCGTGG CTCACCTGAC GGGCACCGGC
ATCTCCAAGA CCGGCGTGTC CACCGGCGGC GCCAACATCA GCCGCTGGGG CTTTCGCGGC
ACGGAAGACC TCGGCGGCGG CCTGGCCGCC AGCTTCTGGC TGGAAGCCGG GCTGGATGTC
GACACCGGCA GCGGCAAGGG GGCGGGCGGT GGCCTGAGCT TCAACCGCCG CTCCACGGTC
AGCCTGTCCG GCCCGTTCGG CGAAGTACGC CTGGGACGCG ATGATTCAGC CACCTTCCTG
AGCACCCTCA TCTTCGATCC GTTCCTCACC AACGGCGTCG GGGGCAACAT GGCCTTCATC
ATGCTCGGCG CGCCTATCCA GATCAGCAAT GCCGTGAGCT ACTTTTTGCC CGGCAACCTG
GGCGGTTTCT ACGGACAGGT GCAGTACGCG TTTGGCGAGC CGCCTGCCAC CGCCACCAAC
ACCCACCAGG GCAACTATGC CGGTGCCCGT TTCGGCTACC GCAGCGGCCC GGTGAATGCG
GCATTGGCCG CCGGCAAGCT CAAGGGTGCG ACCGCGGCGC AGGACATCGA GATCCGCAAC
GTGGGGGCCT CCTACGACCT GGGGATGGTC AAGCCCATGC TGCTGTGGGC CACCGAAAAA
ACCGGCACCG CGAAAATCAC CGCCCTTGAG CTGGGGCTGA CGGCACCTGT CGGCGCCGGT
GAAGTGCGTG CGCAGGTCAG CCGCTACGAC ACGGCCTCCA GCAATGCCGA CTGGCGCAAG
TACGCCGTCG GCTATGGCTA CAACCTGTCC AAGCGGACGC AGGTCTATGG CAGCTATGGA
CACCTGAGCA ACAAGGCGGG CGCCCAGAAG TCGATCGGTG TTCAGGGCCT GACGGCCACC
GGGACGACGC TGGGGGGCAA GTCGAGCGGT TACGAGGTGG GCATCCGCCA CAGCTTCTAA
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| Protein sequence | MKKSLIAIAA MAAVGCASAQ SSVTLFGVLD VGVAHLTGTG ISKTGVSTGG ANISRWGFRG
TEDLGGGLAA SFWLEAGLDV DTGSGKGAGG GLSFNRRSTV SLSGPFGEVR LGRDDSATFL
STLIFDPFLT NGVGGNMAFI MLGAPIQISN AVSYFLPGNL GGFYGQVQYA FGEPPATATN
THQGNYAGAR FGYRSGPVNA ALAAGKLKGA TAAQDIEIRN VGASYDLGMV KPMLLWATEK
TGTAKITALE LGLTAPVGAG EVRAQVSRYD TASSNADWRK YAVGYGYNLS KRTQVYGSYG
HLSNKAGAQK SIGVQGLTAT GTTLGGKSSG YEVGIRHSF
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