| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3598 |
|---|
| Symbol | |
|---|
| ID | 4013744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3800113 |
|---|
| End bp | 3801099 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637943257 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_550401 |
|---|
| Protein GI | 91789449 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.202034 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA AACCCGTCCG TGTTGCCGTC ACTGGTGCAG CTGGTCAAAT CGGTTATGCC
TTGTTGTTCC GTATCGCCTC TGGCGAGATG CTCGGCAAGG ACCAGCCCGT CATTCTGCAA
TTGCTCGAAG TGCCGGTTGA AGGCCCCCAG AAAGCGCTCA AGGGCGTGAT GATGGAGCTT
GACGACTGCG CATTCCCGCT GCTGGCCGGC ATGGAGGCGC ACAGTGACCC GATGACCGCG
TTCAAGGATG CCGACTACGC GCTGCTGGTC GGTTCGCGCC CGCGCGGCCC CGGCATGGAG
CGCGCTGAAC TGCTGGCCGT CAACGGCGCC ATCTTCACCG CGCAAGGCAA AGCCCTCAAC
GCCGTGGCCA GCCGCAACGT CAAGGTGCTG GTGGTCGGCA ATCCGGCCAA TACCAACGCC
TACATCGCCA TGAAGAGCGC GCCCGACCTG CCGCGCAAGA ACTTCACCGC CATGCTGCGC
CTGGATCACA ACCGTGCCGC CAGCCAGATC GCTGCCAAGA CCGGCAAGGC CGTGGCTGAC
ATTGAAAAAC TCACCGTCTG GGGCAACCAC TCGCCCACGA TGTACGCCGA CTACCGTTTT
GCCACCATCA ACGGCGAAAG CGTGGCCAAG ATGATCAACG ACCAGGAATG GAACGCCAAT
GTGTTCCTGC CCACCGTGGG CAAGCGTGGC GCCGCCATCA TTGAAGCCCG TGGTTTGTCG
TCGGCGGCCT CGGCTGCCAA CGCCGCCATC GACCACATGC GCGACTGGGC TCTCGGCACC
AATGGCAAAT GGGTCACCAT GGGCATCCCG TCGGACGGCC AGTATGGCAT CCCGAAAGAC
ACGATGTTCG GTTTCCCCGT GACCTGCGAA AACGGCGAGT ACAAACTGGT CGAAGGCCTG
GAGATTGACG CGTTCAGCCA GGAGCGTATC AACAAGACGC TGGAAGAATT GCAAGGCGAG
CAGGCCGGCG TTGCCCATTT GCTTTAA
|
|---|
| Protein sequence | MSKKPVRVAV TGAAGQIGYA LLFRIASGEM LGKDQPVILQ LLEVPVEGPQ KALKGVMMEL
DDCAFPLLAG MEAHSDPMTA FKDADYALLV GSRPRGPGME RAELLAVNGA IFTAQGKALN
AVASRNVKVL VVGNPANTNA YIAMKSAPDL PRKNFTAMLR LDHNRAASQI AAKTGKAVAD
IEKLTVWGNH SPTMYADYRF ATINGESVAK MINDQEWNAN VFLPTVGKRG AAIIEARGLS
SAASAANAAI DHMRDWALGT NGKWVTMGIP SDGQYGIPKD TMFGFPVTCE NGEYKLVEGL
EIDAFSQERI NKTLEELQGE QAGVAHLL
|
|---|
| |