Gene Bpro_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3565 
Symbol 
ID4013750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3764390 
End bp3765460 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID637943227 
Producthypothetical protein 
Protein accessionYP_550371 
Protein GI91789419 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.501523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCA CCCACACCCA AAAAAGCGTC GCCGCCTGGT GCCTGATTGC GGCGCTGGCC 
GTTGTCGCGC TGTGGCTGCT GGGCCCGGTG CTGACGCCTT TTGTGGTGGC GGCGGTGCTG
GCCTATGCGC TGACGCCGCT GGTGAACAGG CTGGACAGCC TCGGCAAGGG CCGCCTGCCG
CGCGTGGTGG CGGTGTTGCT GGTGGAGTTT TTGTTTATCG TGGTGCTGCT CGGCCTGTTT
CTGCTCATCG TGCCCATCAT GGCCAAGGAA CTGCCGCTGC TGCGCGAACA GGTGCCGCTG
CTGGCGGACC GCCTCAACAC CGAATTGGCG CCATGGCTGG CGAAGTTCGG CTTTCGGGTG
TCGCTCGACG TGGCCAGCAT CAAGGCCTTT GTGCTCAAGT ACCTCAACGC CAATTTTGAG
GACGTCTTCG GTTCGCTGCT GTCCTCGCTC AAGCTCGGCG GCAGCGTGGC GCTGGCCATC
ATGGGCAATG CCGTGCTGAT CCCGGTGGCA CTTTTTTACC TGCTGATGGA CTGGAACAGC
TTTGTCGCCC GCGCGCTCGA ACTGGTGCCG CCGCGCCTGC GCGAGGGTTT CGACAGCTTC
ACCAGCGAGG CCGATTCGGT GCTGGGTCAA TACCTGCGCG GACAGTTGCT GGTCATGCTG
ATCATGGCCG TTTTCTATGC CACTGGGCTG GCGCTGTTTG GCCTGGACCT GGCGGTACCC
ATCGGCGTTT TTACCGGGCT GGCCATGTTC ATTCCCTACC TGGGTTTTGG CTTGGGGCTG
GTGCTGGCGA TGCTGGCCGG CGTGCTGGAA TTCGCCTCCC TCAAGGCGCT GGTCATGGTA
GCGGTGGTGT ATGGGCTGGG GCAGGTGATT GAAAGCCTGT ACCTTACGCC GCGGCTGGTG
GGGGAGCGCA TTGGCCTGCA CCCGCTGGCG GTTATCTTTG CCTTGCTGGC ATTTGGTCAG
ATGTTCGGGT TTGTCGGCGT GCTGGTGGCA CTGCCGGTAA GCGCCGTGTT GCTGGTGGGT
ATTCGTCGCC TCAAGGCCAG CTACATCGCC AGCAGGCTTT ACACGGCCTG A
 
Protein sequence
MQFTHTQKSV AAWCLIAALA VVALWLLGPV LTPFVVAAVL AYALTPLVNR LDSLGKGRLP 
RVVAVLLVEF LFIVVLLGLF LLIVPIMAKE LPLLREQVPL LADRLNTELA PWLAKFGFRV
SLDVASIKAF VLKYLNANFE DVFGSLLSSL KLGGSVALAI MGNAVLIPVA LFYLLMDWNS
FVARALELVP PRLREGFDSF TSEADSVLGQ YLRGQLLVML IMAVFYATGL ALFGLDLAVP
IGVFTGLAMF IPYLGFGLGL VLAMLAGVLE FASLKALVMV AVVYGLGQVI ESLYLTPRLV
GERIGLHPLA VIFALLAFGQ MFGFVGVLVA LPVSAVLLVG IRRLKASYIA SRLYTA