Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3565 |
Symbol | |
ID | 4013750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3764390 |
End bp | 3765460 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637943227 |
Product | hypothetical protein |
Protein accession | YP_550371 |
Protein GI | 91789419 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.501523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATTCA CCCACACCCA AAAAAGCGTC GCCGCCTGGT GCCTGATTGC GGCGCTGGCC GTTGTCGCGC TGTGGCTGCT GGGCCCGGTG CTGACGCCTT TTGTGGTGGC GGCGGTGCTG GCCTATGCGC TGACGCCGCT GGTGAACAGG CTGGACAGCC TCGGCAAGGG CCGCCTGCCG CGCGTGGTGG CGGTGTTGCT GGTGGAGTTT TTGTTTATCG TGGTGCTGCT CGGCCTGTTT CTGCTCATCG TGCCCATCAT GGCCAAGGAA CTGCCGCTGC TGCGCGAACA GGTGCCGCTG CTGGCGGACC GCCTCAACAC CGAATTGGCG CCATGGCTGG CGAAGTTCGG CTTTCGGGTG TCGCTCGACG TGGCCAGCAT CAAGGCCTTT GTGCTCAAGT ACCTCAACGC CAATTTTGAG GACGTCTTCG GTTCGCTGCT GTCCTCGCTC AAGCTCGGCG GCAGCGTGGC GCTGGCCATC ATGGGCAATG CCGTGCTGAT CCCGGTGGCA CTTTTTTACC TGCTGATGGA CTGGAACAGC TTTGTCGCCC GCGCGCTCGA ACTGGTGCCG CCGCGCCTGC GCGAGGGTTT CGACAGCTTC ACCAGCGAGG CCGATTCGGT GCTGGGTCAA TACCTGCGCG GACAGTTGCT GGTCATGCTG ATCATGGCCG TTTTCTATGC CACTGGGCTG GCGCTGTTTG GCCTGGACCT GGCGGTACCC ATCGGCGTTT TTACCGGGCT GGCCATGTTC ATTCCCTACC TGGGTTTTGG CTTGGGGCTG GTGCTGGCGA TGCTGGCCGG CGTGCTGGAA TTCGCCTCCC TCAAGGCGCT GGTCATGGTA GCGGTGGTGT ATGGGCTGGG GCAGGTGATT GAAAGCCTGT ACCTTACGCC GCGGCTGGTG GGGGAGCGCA TTGGCCTGCA CCCGCTGGCG GTTATCTTTG CCTTGCTGGC ATTTGGTCAG ATGTTCGGGT TTGTCGGCGT GCTGGTGGCA CTGCCGGTAA GCGCCGTGTT GCTGGTGGGT ATTCGTCGCC TCAAGGCCAG CTACATCGCC AGCAGGCTTT ACACGGCCTG A
|
Protein sequence | MQFTHTQKSV AAWCLIAALA VVALWLLGPV LTPFVVAAVL AYALTPLVNR LDSLGKGRLP RVVAVLLVEF LFIVVLLGLF LLIVPIMAKE LPLLREQVPL LADRLNTELA PWLAKFGFRV SLDVASIKAF VLKYLNANFE DVFGSLLSSL KLGGSVALAI MGNAVLIPVA LFYLLMDWNS FVARALELVP PRLREGFDSF TSEADSVLGQ YLRGQLLVML IMAVFYATGL ALFGLDLAVP IGVFTGLAMF IPYLGFGLGL VLAMLAGVLE FASLKALVMV AVVYGLGQVI ESLYLTPRLV GERIGLHPLA VIFALLAFGQ MFGFVGVLVA LPVSAVLLVG IRRLKASYIA SRLYTA
|
| |