| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3542 |
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| Symbol | |
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| ID | 4013805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3742794 |
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| End bp | 3744197 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637943204 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_550348 |
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| Protein GI | 91789396 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.179333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGTA TTGACCAGCG TACGCGCATG TTGCTGGAAG CGCCGATCGG CCCCACGCTG
CTGCGCCTTG CCGCACCCAA TGTGCTGGTG ATGGTCGCGC AGGCCGCCGT GGGCCTGATC
GAAACCTGGT TCGTCGGCAA GCTGGGCACC GATGCATTGG CCGGCATGGC GCTGGTGTTT
CCCCTCGTGA TGCTGATGCA GATGACCTCG GCCGGTGCGA TGGGCGGGGG CATCGCCTCG
GCGGTGGCGC GGGCGCTGGG CGCAAACCGG CGCGATGATG CCAATGCGCT GGTCCTGCAT
GCCATGGTGA TCGCGCTGGG TTTTGGCCTG GCCTTCAGTC TGTGCCTGCT GCTGGGCGGC
CGCTGGCTGT ATGCGCAAAT GGGCGGCAGC GGCGCCTCGC TGCAGGCGGC ACTGGTCTAT
TCAAACTGGG TGTTCGCCGG CGCAGTGCTG GTGTGGCTGT TCAACTCGCT GGCGGCGGTC
ATACGCGGTA CCGGCAACAT GGCGGTACCG GCCAACGTCA CGGTAGCGGG CGTCCTGGCG
CTGGTGCCGC TGTCGCCTTT GCTGATTTTT GGCTGGGGCC CGGTTCCGGC GCTGGGCATT
GCGGGCGGCG CGATTGCGCT GCTGCTGTAT TACCTGGCCG GCAGCATTGC ACTGCTTGTC
TATCTCGGGT CGAGCCGCAG CCTGCTCAAA CCTTCGCTGA AAAACGTCCA GTTGCGCTGG
CTGTTTTTTC GGGACATTCT GCGCATTGGC CTTCTTGGCT CCATTTCCAC CGTTGCGACC
AATCTCTCGA TTGCGGTGGC GACATCGCTG GCGGGCGGAT TTGGGCCTGC GGCTATTGCC
GGTTACGGCA CGGCGTCGCG CCTGGAGTAT TTGCTGGTGC CCCTGGTTTT TGGTTTGGGT
GCGCCGCTCG TGGCGATGGT GGGCACCTGC ATGGGGGCGG GCCAGCATGA ACGCGCATTG
CGTGCGGCCT GGACAGGCGC GGCCATCGCC TTTGCGCTGA CCGAATCGAT TGGCCTGGTG
GCGGCCGCAT TTCCGCGGGC CTGGCTCTCG CTGTTCGGCA ATGACCCCGC AATGCTTGAA
GCCGGAACGC TTTACCTGCG CGCGGTCGGC CCGCTCTATG GATTTTTCGG CCTCGGCCTC
GTGCTGTATT TCGCCTCGCA GGGTGCGGCC CGCCTGCTCT GGCCCGTGAT GGGCAACCTG
GCGCGCCTTG TGGTCGCCGC ACTGGGCGGC TGGCTGGCCA TTCGCTGGGG CGGGGGCCTG
GTTCAGGTGT ATGCCGCACA GGGCGCGGCG CTGGTGGTGT ATGGCGTGGT GATTGCCGCT
GCCATTGCCG GCGGGGCCTG GTTCGGCCGG GTCGGCTGGC CGTGCAGCAC GGCAACGCTG
CTGCGCCGTC TCCAGTCCGG GTGA
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| Protein sequence | MTGIDQRTRM LLEAPIGPTL LRLAAPNVLV MVAQAAVGLI ETWFVGKLGT DALAGMALVF
PLVMLMQMTS AGAMGGGIAS AVARALGANR RDDANALVLH AMVIALGFGL AFSLCLLLGG
RWLYAQMGGS GASLQAALVY SNWVFAGAVL VWLFNSLAAV IRGTGNMAVP ANVTVAGVLA
LVPLSPLLIF GWGPVPALGI AGGAIALLLY YLAGSIALLV YLGSSRSLLK PSLKNVQLRW
LFFRDILRIG LLGSISTVAT NLSIAVATSL AGGFGPAAIA GYGTASRLEY LLVPLVFGLG
APLVAMVGTC MGAGQHERAL RAAWTGAAIA FALTESIGLV AAAFPRAWLS LFGNDPAMLE
AGTLYLRAVG PLYGFFGLGL VLYFASQGAA RLLWPVMGNL ARLVVAALGG WLAIRWGGGL
VQVYAAQGAA LVVYGVVIAA AIAGGAWFGR VGWPCSTATL LRRLQSG
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