| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3510 |
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| Symbol | |
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| ID | 4013812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3711583 |
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| End bp | 3713148 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943172 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_550316 |
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| Protein GI | 91789364 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.269968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAG TGCTGAACAA AATTCGTGTC CTCGTCGTGG AGGATGAAAT CGTCGTATCG
GAAGACCTGC AGCAACGGCT GTCGGGGCTC GGGTACGAAA TCACCGGCGC GGCGGACACC
GCGGCCGCTG CGATCCGGCT TGCCGCATCG CAGCGGCCCG ACGTGGCTCT GATGGATATC
ATGTTGCACG GCCGGCCCGA GGGTATCGAC GCTGCCGAAC ACCTGCGCGG CGAGCTGGAC
ATTCCGGTCA TCTATCTCAC CGCACACAGC GATACGGCCA CCCTGCATAG AGCCAGGTTC
ACCGACCCTT CGGGCTACAT CGTCAAACCG TTCGATGACC AGCAACTGCG CGTCGCCATC
GAACTGGCGC CGTTTCGCCA TGAGATGGAG CGCAAGGCTC GCCGGGTCGC CCGCTGGATG
ACTGCCACGC TGACGAGCAT CGGCGACGCC GTCATCGCCA CCAACACCCA TTCAGAAATT
CTGCTGCTCA ATCCTGCCGC GGAGAAGCTG ACCGGCTGGA CGCAGGATGA GGCTACCGGA
AAGCCATCCG GCGAAGTGGT GCGCCTGGTG AACCAGAAAA CCCGCCAGCC TCTGGAAGAC
CCGGCCACAC GCGCCCTGCG CGATGGCCTG GTCGTTCGTT TGGACCCGGA CACCGTGCTG
ATCACGCGCG AGGGCGGAGA ACGCTTTGTG GATGACAGCG CTTCGCCCAT TACCGACGAA
ACCGGCAAGG TCCTGGGCGC TGTCGTGGTG CTGGTCGATG CCACGGGCCG GGTCGCCGCG
CAGAACCGCG TGGATACCTT GACGCGCCAG GTGAAGGGGC TGCTCGCCGA GAAGGACAAC
TATGAACTGA AAGGCGCTGA ACTCGAAGCC TTCGCCACTG CCGTGAGCCA CGACTTGCGG
GGGCCGCTGC AGGCCATTGC CGGCTTCTCC GAGCTTCTGG CCCGGTCGCA GCGCGAGCGG
CTCGACGCCT CGGGACAACT GTTCCTCGAT CGGGTTCACG CAAGCGCGCT GCAAATGGGC
TGCATGGTGG AGGACTATCT GGGCTTTTTG AAATCGAATC GCGAGCAAAC ACTTAGCGTG
ACAGAGCTGG ACCTGAAGCA CCTCGCGCAC GCAGTGTTTG CCGAACTCGC CCTCGTGCCG
GGCCAGAAGC CGGCGCAGTT CGTGTGCGAG GAATTGCCGC GGGCCTGGGG CGACGAGGCC
ATGCTCCGGC AGGTGCTCGT CAACCTGATC GGCAATGCGC TCAAGTATTC GGCGCAGCGG
GAGCATCCGA TGGTGGAAGT CGGCGCGATA GCAGGTGAAG AAGCGGGCGA GGACTGCCAT
ACCTTCTTCG TCCGTGACAA CGGTGCGGGC CTGGATCTCG CGAACGCAGC GAAACTCTTC
GAGCCGTTTC AACGCTTCCA CAGCACGGCC GAATTCCCCG GCACCGGGGT GGGCTTGGCC
ATCGTCAAAC GCATCGTCGA ACGCCACGGT GGCCGGATGT TGGCCGAGAG CCAGCCTGAT
GCCGGCGCCA CGTTTTTCTT CACCTTGCCG TCGAAGGCTC CCGGCATGAC GGCGGCCCTG
CAATGA
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| Protein sequence | MEQVLNKIRV LVVEDEIVVS EDLQQRLSGL GYEITGAADT AAAAIRLAAS QRPDVALMDI
MLHGRPEGID AAEHLRGELD IPVIYLTAHS DTATLHRARF TDPSGYIVKP FDDQQLRVAI
ELAPFRHEME RKARRVARWM TATLTSIGDA VIATNTHSEI LLLNPAAEKL TGWTQDEATG
KPSGEVVRLV NQKTRQPLED PATRALRDGL VVRLDPDTVL ITREGGERFV DDSASPITDE
TGKVLGAVVV LVDATGRVAA QNRVDTLTRQ VKGLLAEKDN YELKGAELEA FATAVSHDLR
GPLQAIAGFS ELLARSQRER LDASGQLFLD RVHASALQMG CMVEDYLGFL KSNREQTLSV
TELDLKHLAH AVFAELALVP GQKPAQFVCE ELPRAWGDEA MLRQVLVNLI GNALKYSAQR
EHPMVEVGAI AGEEAGEDCH TFFVRDNGAG LDLANAAKLF EPFQRFHSTA EFPGTGVGLA
IVKRIVERHG GRMLAESQPD AGATFFFTLP SKAPGMTAAL Q
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