| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3427 |
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| Symbol | |
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| ID | 4013924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3625332 |
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| End bp | 3626744 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637943090 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_550234 |
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| Protein GI | 91789282 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA TTCATTCAAC GCTGCGCATG TCGCTGGCGC CCCTGGTGGC AGCGCTGGTG
CTGGCCGGCT GCGCTACCAG CGCCTCGATA GACGCGTCCA GCCTGCCGAA GGCGCCGCAA
GCCTTCAAGG AAAACGCCAG CCAGGTCGCT TCCGCAACGG CCACCTCCGC CCAGGTGCAA
TCCCAGGGCA CCTGGTGGAA GGTGTTTGCC GACCCCGTGC TGGACCAGCT GGTGGAGCAG
GCCGGCCGCA ACAACAACAG CGTGCAAGTC GCGGCCGGGC GCCTGGCCCA GGCGAGGGCG
ATTGCCCGCA ACACCGACGC CGACCGCCTG CCTCAGGTCG GCCTGGGCGC CGGCGCCACC
CGCCAGAGCA ACGCCACCAC CGGCAATGTG CCGCAAACCG TAGTGAGCGC CAATGCCAAC
TTCTCTTACG AAGTGGACCT GTTCGGCAAG CTCTCGCTGA ATTCCGACGC CGCCTCGCTG
GACGCCCAGT CCCGCGAAGC GCTGCTGCGC AGCACGAAAT TGCTGGTGCA GGCCGATGTG
GCCCAGACCT ACCTGAACCT GCGCGCACTT GACACCGAAC GCTCGCTGGT GCGTGACACG
CTGCAGGCCT ACCGCAACAC CCTGCGCCTG ACCGAAGTGC GCTTCAAGGA GGGCGACGTG
GCCGAGCTCG ACGTGGCCCG CGTGCGCGCC GAAGTCGCTT CCACGGAGTC GGAGGCGCTG
GCGCTGGACC GGCGCCGCGC CGAACTCGAG CATGCGCTGG CCGTGCTGGT GGGCGAGGTC
GCCTCCAGCT TCCAGGTGGC GCCCGCCGAA TGGACCACGG CGCTGCCGGT CATCCCGGCC
GGCGTGCCCA GCACCGTGCT GGTTCGCCGC CCCGATGTGT CGGCGGCACA AAGCACCATG
CAGGCGGCAC AGGCCCGTGC CGGTGTGGCC AAGGCCGCCT GGTTCCCCAC GTTCTCGCTG
ACAGCCACGG GCGGCTATGC GGCACCGGAG ATCAGCGACC TGTTCAAGCT CTCCACCCGC
GCCTGGGGCG TGGGCGCGTT GTTGTCGCTG CCGATCTTTG ACGGCGGCCG CCGCGAAGCC
GGCGTGCAGA ACGCCAATGC CGAACTCGAC ATCGCATTGG CCAACTACCG CGAACAGATC
CTGGTGGCCT TCAAGGATGT GGAAGACCAG CTGGCGGCGC TGCGCTTGCT GGCCGACCAG
TCCGAAGCGC AGTCGCGCTC GGTGGCCTCC GCTACCCGCG CCACGGTGCT GTCGGACTCG
CGCTACCGCA ACGGCTTCGT CAGCCAGCTC GAGTTGCTGG ACGCCCAGCG CAGCGAACTG
CGCAACCGGC GGCAGGCGTT GCAGGTGAAG GCATCGCAGT ACCTGGCCAC GGTGGGGCTG
ATCCGCGCGT TGGGTGGTGG CTGGAGCACC TAA
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| Protein sequence | MNRIHSTLRM SLAPLVAALV LAGCATSASI DASSLPKAPQ AFKENASQVA SATATSAQVQ
SQGTWWKVFA DPVLDQLVEQ AGRNNNSVQV AAGRLAQARA IARNTDADRL PQVGLGAGAT
RQSNATTGNV PQTVVSANAN FSYEVDLFGK LSLNSDAASL DAQSREALLR STKLLVQADV
AQTYLNLRAL DTERSLVRDT LQAYRNTLRL TEVRFKEGDV AELDVARVRA EVASTESEAL
ALDRRRAELE HALAVLVGEV ASSFQVAPAE WTTALPVIPA GVPSTVLVRR PDVSAAQSTM
QAAQARAGVA KAAWFPTFSL TATGGYAAPE ISDLFKLSTR AWGVGALLSL PIFDGGRREA
GVQNANAELD IALANYREQI LVAFKDVEDQ LAALRLLADQ SEAQSRSVAS ATRATVLSDS
RYRNGFVSQL ELLDAQRSEL RNRRQALQVK ASQYLATVGL IRALGGGWST
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