| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3390 |
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| Symbol | |
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| ID | 4013926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3583552 |
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| End bp | 3584271 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943054 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_550198 |
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| Protein GI | 91789246 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00687646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.166362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCT TGCAATCAGT GCCCACCGTG CCGTCCGACG TCAGTTCGGA CGCAGAGCTG
GTCAGCCTGT CCATAGCCGG TAACGATCTG GCGTTTGCCC AGATCATGCG GCGCTACAAC
CGTTTGCTCT TTCGCACGGC GCGCAGCATC CTCAAAAGCG AAGACGACAC GCAAGACGCC
TTGCAGGAGG CTTATTTGCG CGCCTGGCGT GCGCTGGCCA CCTTTCGCGC CGAGGCCAGG
CTTTCCACCT GGCTGGTGCG CATCGTCGCC AACGAGGCAC TGGGGCGGCT GCGGCGCAAT
GGTGCGCAGA CTGCCCGCGT CGTGCCGCTG AGCGCCAGCG TGGATGCCGA TGACGAAACC
CCGGAGATGC AGATGCAAGC CAACCCGAAT GACCAGCCGG AGCCATCCGT CATGCGTGCG
CAGATACGCC AGCAGATTGA AGCCCGGATT GACACCTTGC CCGATGCCTT TCGCACCGTG
TTCATGCTCA GGGGGGTTGA GGAGATGAGT GTGGAAGAAG TTGCACTGGT GCTGGGCATA
CCCGAAGCGA CGGTGCGGAC CCGGTTTTTT CGTGCCCGCA GCATGTTGCG CGAAGGCCTG
TCACGCGACA TCGACATGGC CGTTGGTGAC GCCTTTTCAT TTGCCGGCGC GCGCTGCGAC
CGCATTGTGG CGGGCGTGCT GGCAAAGATT GCCCACGAGC GTGAATCCTC TCGCCCGTGA
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| Protein sequence | MNTLQSVPTV PSDVSSDAEL VSLSIAGNDL AFAQIMRRYN RLLFRTARSI LKSEDDTQDA
LQEAYLRAWR ALATFRAEAR LSTWLVRIVA NEALGRLRRN GAQTARVVPL SASVDADDET
PEMQMQANPN DQPEPSVMRA QIRQQIEARI DTLPDAFRTV FMLRGVEEMS VEEVALVLGI
PEATVRTRFF RARSMLREGL SRDIDMAVGD AFSFAGARCD RIVAGVLAKI AHERESSRP
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