Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3327 |
Symbol | |
ID | 4014019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3522150 |
End bp | 3522902 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637942991 |
Product | GntR family transcriptional regulator |
Protein accession | YP_550135 |
Protein GI | 91789183 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.545906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATGGAG ATGAGATACT AGTCATATCG ACAGGAGGTA TTTTGGCAAC AAGCAAAAAA ATTCGGCCAA CACCCCGCTC CCGTTCCGAC AGGGCGCCCG CTGGCGGAAA TGATCTGAGT CTCACGGAGC AGGCCTACAG CCAGCTTGAA GAGATGATTG TCACCCTCAA GCTGGCACCC GGAAAGCTCG TGACCGAAGC TGAATTGTCT GAATTGCTGG GTATTGGGCG AACCCCCATC CGGGAGGCCC TGCAACGGCT GGCGGCTCAG CGGCTGGTCC GTGTCGTGCC GCGCCGCGGC ATCGCGATCT CGGACATAGA CGTGAAAGCG CAGTTGCGGC TTCTGGAGGT CAGGCGAGAG CTGGAGCGGC TCATGTGTCG AAATGCAGCT CGCAGGGCAT CCGCTGAAGA AAGAGCCGAG CTTGGCCGGC TTGCCGCGGC CTTCAAGGAG TGCGCAAAAA CCGGGGATGC GGAAAAGTTC ATGCGCATCG ACAGGGCGTT TAATGAACTC TGTCTCGTGG CGGCCCGCAA TGAGTTCACC ACCAGTGCAA TGAGCCTGAT GAATTCACTC TCCAGGCGCT TCTGGTTTCT TCATTATCGT CAGGCCGCGG ACCTTCCACT TACGGCGCGT TTGCATGCCG CCCTGGCTCA TGCGATCGCC ATCGGAGACG AGGAAGCTGC TGCACAGGCT TGCGACAAGC TGCTGGATAC GATCCATCAA TTCACCCGCG CGACCGTTAG TACCGATTTT TAA
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Protein sequence | MYGDEILVIS TGGILATSKK IRPTPRSRSD RAPAGGNDLS LTEQAYSQLE EMIVTLKLAP GKLVTEAELS ELLGIGRTPI REALQRLAAQ RLVRVVPRRG IAISDIDVKA QLRLLEVRRE LERLMCRNAA RRASAEERAE LGRLAAAFKE CAKTGDAEKF MRIDRAFNEL CLVAARNEFT TSAMSLMNSL SRRFWFLHYR QAADLPLTAR LHAALAHAIA IGDEEAAAQA CDKLLDTIHQ FTRATVSTDF
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