| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3309 |
|---|
| Symbol | |
|---|
| ID | 4014040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3505276 |
|---|
| End bp | 3506052 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637942974 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_550118 |
|---|
| Protein GI | 91789166 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCT TGTTGCCCAG CGCGTCCCGC ACGCACCTTG TCCTGATTCC CAGCTACAAC
CCCGGCCCCA AGGTCTATGA CACGGTGCGT TCGGCACGCG CGCAGTGGAC GCCTGTCTGG
GTCGTGGTCG ATGGCAGCAC CGATGCCAGC GCCGCAGGCC TGCAGGCGAT GGCGGCGCAG
GATGAAGGCC TGCGGGTGCT GGTGCTGCCG CACAACGTCG GCAAGGGCGC TGCCGTGCTG
CACGGGCTGG ACCTGGCCGC GGCGCAAGGC TTCACGCATG TGTTGACGAT GGACTCCGAT
GGCCAGCACC CGGCGCCCCT GATTCCCGAC TTCATGGCCG CCTCTGCCGC CCAGCCCGCC
GCCATGGTGC TGGGCGTGCC GGTGTTCGCG GCCGATGCGC CGCGGCTGCG CGTCAACGGC
CGCAAGGTGT CTAACGGTTG GGCCAACCTG GAAACCCTGT GGGCCGGCAT TGGCGATTCG
CTGTTCGGCT TTCGCGTCTA CCCGATCGAG CCGCTGCGCC AGGTGATGCA CGGGCAGCGC
TGGATGCGCC GTTTTGACTT TGACCCCGAG GCAGTGGTGC GCATGTGCTG GCGCGGCGTC
AAGCCGGTCA ACCTGCCGGC CACGGTCAAA TATTTCCGCG CCGACGAAGG CGGGGTCTCG
CACTTCAATT ACCTGCGCGA CAACCTCTTG CTGACCTGGA TGCACTCGCG CCTGTTTCTG
GGGTTTGTGC TGCGTCTGCC CGTGTTGCTG GCGAGGCGCT TGTTCGGGCG CCCATGA
|
|---|
| Protein sequence | MNALLPSASR THLVLIPSYN PGPKVYDTVR SARAQWTPVW VVVDGSTDAS AAGLQAMAAQ
DEGLRVLVLP HNVGKGAAVL HGLDLAAAQG FTHVLTMDSD GQHPAPLIPD FMAASAAQPA
AMVLGVPVFA ADAPRLRVNG RKVSNGWANL ETLWAGIGDS LFGFRVYPIE PLRQVMHGQR
WMRRFDFDPE AVVRMCWRGV KPVNLPATVK YFRADEGGVS HFNYLRDNLL LTWMHSRLFL
GFVLRLPVLL ARRLFGRP
|
|---|
| |