Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3084 |
Symbol | |
ID | 4014242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3251834 |
End bp | 3253705 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637942751 |
Product | inner-membrane translocator |
Protein accession | YP_549896 |
Protein GI | 91788944 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00985997 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0142053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGTTT CAGTGGTCCA GTTGCTGGGC GGGCTGTCGT ATGCGACCAC GCTGTTTTTG ATGGCGGCGG GCCTGACGTT GATTTTCGGC GTCACGCGCA TCGTCAATTT TGCGCATGGC AGTTTCTTCA TGCTGGGGGC GCTGTTCACC GCGCACTGGG TCACCGAATG GTTTCCGGCG TGGGGCGAGA GTGCGCCCCT TTACCTGCTG GCTATTCTTT TTGGAGCTGC CTGCGCCGGG CTGGTTGGGG CTTTAGCCGA TTTTCTTCTC CTGAGAAGAA TGAGCGGCGC GCCGGAGTTG TACCAGCTGG TCGCGACGTT CGGCCTGACG CTGGCGCTGC ATGACGCCAT GCAGTGGGGC TTTGGCCCCG ACGAGGTGTT TGCGCCGCGT TTTCCGGGGC TCAAGGGCTC GGTGCAGATG GGTGATGAGT TCTTTCCGGT GTATCAGCTC GTGATGATTG CGCTGGGCCC GCTGGTCTGG CTGGGCCTTC ATCTGCTGCT GCGTCACTCG CTGTTTGGTC GGCGCCTGCG CGCCGCCACG CAAGACCGGT CGATGCTGGC GGCGCTCGGC GTCAACCCCA AACCGCTGAT GCTGGGAGCG GTGGTCCTCG GCTGCGCGCT GGCCGGCTTG GGCGGGGCCC TGCAATTGCC CCGTGAACCG GCGCACCTGC AAATGGACAT GAACGTGATT GTCGAGACCT TTGTCGTGGT CGTCACGGGC GGCCTGGGCA GCATCGGGGG CGCATTTGTG GCGGCCCTGC TGATCGGCCT CGTGCATGCC CTGGGTATCG CCGTGCTGCC GCAGGCCACG CTGGTCATCG TCTTTTTGAC CATGGCGGCG GTGCTGGTGC TCAGGCCCCA GGGGCTCAAT GGTCTGTCGG TGGCTTCGCA GGAGGGCGTG CGCGAGCCGG CGCAGCGGTT TCGCGGCCTG GACCTGACGC GCTTCTGGAA CGGCGCCATT GCCGCGGTGC TGGTGCTACT GTCGGGGCTG GCCTGGCAGG GCGGGGCATA CTGGCAAACG CTGGCGGCCG ATGCGTTGAT TCTGTTGATT TTTGGCATCA GCCTGCAGTC GATGATGGCG CTCGGCGGCC TGGTCAGCTT TGGCCATGCA GCTTTTTTTG CACTGGGCGG CTATGGTGCG GCCCTGTCGC ACAGCCTGTG GGGTGCATCG CTGCCGGTCG CCCTGGCGGC GGGTTGCGTG ACGGCCCTGG TGGTCGCCGC CGTGTTTGGC GCTGCGGTGG TGCGCAGCGC CGGGGTGTAC CTGGCCATGC TGTCGCTGGC GCTGGCACAG GTGATCTGGG CCGGGGCCAC CCAGTGGGTC AGCCTCACCG GAGGCGACAA CGGCCTGATC GGGCTGGCCC TGGTGGAAGA GGAGGGCCGG CCGCTGTTTT TCGCGCTGCT GGTGGTGCTG GCGCTGGCTT GCGTGTTGGC GCTGCGCCTG CTGAGCCGGT CGGTCATGGG GGCGGCGCTG CAGGCTGTGC GCGACGCGCC CGCGCGGGCG GCCGCTTCCG GCTTGCCCGT GGGCTGGCTC AAGTACCGCG TCTTTCTGGA GAGTGCGGTG CTGGCAGGCC TTGCCGGCGG CCTGTTTGCC GCGCACAAGG GCGCGGTGTT TCCCTCCATC GCCGCGGTGG CTACCTCGGT GGATGCCTTG CTGGTGGTTT TGCTCGGCGG CGTTCACCAG CTTTGGGGCG CCGTGGTGGG CAGCGCCGTG TTGAGCTATG TCAGCGCGGA GCTGGGCCGT GAAGTGACGT ACTGGCGGGG ATTGCTGGGC CTCTTCATCA TGCTGGTGAT GGTGGCTTCA CCGTCGGGTT TGCTGGGCCT GCTGGGCAGC CGCACCCGCC CGGCCGAGCG GGCAACCGGG AGGGCGGGCT GA
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Protein sequence | MTVSVVQLLG GLSYATTLFL MAAGLTLIFG VTRIVNFAHG SFFMLGALFT AHWVTEWFPA WGESAPLYLL AILFGAACAG LVGALADFLL LRRMSGAPEL YQLVATFGLT LALHDAMQWG FGPDEVFAPR FPGLKGSVQM GDEFFPVYQL VMIALGPLVW LGLHLLLRHS LFGRRLRAAT QDRSMLAALG VNPKPLMLGA VVLGCALAGL GGALQLPREP AHLQMDMNVI VETFVVVVTG GLGSIGGAFV AALLIGLVHA LGIAVLPQAT LVIVFLTMAA VLVLRPQGLN GLSVASQEGV REPAQRFRGL DLTRFWNGAI AAVLVLLSGL AWQGGAYWQT LAADALILLI FGISLQSMMA LGGLVSFGHA AFFALGGYGA ALSHSLWGAS LPVALAAGCV TALVVAAVFG AAVVRSAGVY LAMLSLALAQ VIWAGATQWV SLTGGDNGLI GLALVEEEGR PLFFALLVVL ALACVLALRL LSRSVMGAAL QAVRDAPARA AASGLPVGWL KYRVFLESAV LAGLAGGLFA AHKGAVFPSI AAVATSVDAL LVVLLGGVHQ LWGAVVGSAV LSYVSAELGR EVTYWRGLLG LFIMLVMVAS PSGLLGLLGS RTRPAERATG RAG
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