| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2878 |
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| Symbol | |
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| ID | 4014453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3038039 |
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| End bp | 3041116 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637942542 |
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| Product | putative type 4 fimbrial biogenesis PilY1-related protein signal peptide |
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| Protein accession | YP_549691 |
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| Protein GI | 91788739 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.421399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.561571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA AAATATTTCA ATGCATCGCC GTGCTGCTCG TGTTCGTGGC GCATGTGTCC
ACCAGCCTCG CGGAGGACAT TGAATTGTTC GTGGGCACTC CACCCACTAC CGCTGAAACA
CCGAATGTGC TGATTGTTCT GGACAACACG GCGAACTGGA ACACGGCCTT CGTGAACGAA
AAAGCCGCGC TCGTGTCGGT CTTCCAGGGG ATGCCGGTTG ACAAGTTCCG GGTCGGCTTG
ATGATGTTCA ACGAGACGGG CGGTGGAAAC TCGGGTAATG ACGGTGCCTA TGTTCGGGCG
GCAGCTCGAA CGATCACAAG CAGCAACAAG ACCGCCTACG CCAACCTGAT CGACAGTCTG
GACATTACCG GCGACAAATC CAACGGCGGC AAGGTTGCTA AGGCCATGAT GGAAGCGTAC
TACTATCTCA GCGGGGGCAC GCCGCACGCC GGTAACCAGA AGAACAAGAC CGACTATGCC
CTCAATACCG CGGGCAATGC ATCCGACGAT GCTATGCATG CGCTTGCCGG CAACGCACTG
GCATCGAAGA ACAGCACCAC CTACGTCAAG CCGGGCTCGG GTGATTGCGT CAAAAACTAC
ATCATCTACA TCAGCAACGG CCCGGCTCAA GACAACAGTT CCGACATTGA GACTGCGACG
ACCGCGCTTG CCGCCGCCGG CGGCAAGACG ACCGCCATTT CACTCAACCC CAGCGGTTCG
CAGGACAACC CGGCCGACGA ATGGGCGCGG TTTCTCAAGA AGAGTGCGAT CAAGGGGGTG
GTGTACACGC TCGACGTGAA CAAGGGAACT TCGGGCCAGG GTCCTGGATG GACGGCCTTG
CTGAAAAGCA TGGCATCGCA AAGCGGTGGG CGATATTTTG ATGTGAGCAC CTCAGGTATC
GCGGACGCCA TCAACTCCAT CCTCTCCGAG ATCCAGTCCG TGAACAGCGT GTTCGCGTCG
GTCAGTCTTC CCGTGAGCGT GAACACGCAG GGCACCTACC TGAACCAGGT GTTCGTGGGG
ATGTTCCGGC CCGACGGCGA CAGTATGCCG CGCTGGAAGG GAAACCTCAA ACAGTACAAG
ATGGCATTCA TCAACAATGA GTTGAAGCTG GTCGACGCAG ACGGAACTGC GGCCATCAAC
GGCCAGACTG GGTTCATTAC GGAGTGCGCG CGAAGTTACT GGACCCCGAC GACGGTGGAT
ACCGAGTGGA ACAGCGCGCA GGAAAGCGAC TGTCTCACGG TGGCGGGCGC GGAGTCGTCC
AATTATCCGG ATGGCAACGT CATTGCCAAA GGCGCGCAGG CTTACCAGCT GAGACTGAGT
TCCACCAGGA CTTCGCTCAC TTGCAATGAC GCGACTTGCA CGAGCCTCGT CACCTTCAAC
AATACGAACG TTTCGCAGAC ACAGCTTGGC GTGAGCACCA CGACTGACCG CGATAATGTG
ATCAATTGGG CCGGGGGCAT GGACAACAAG GATGACGAAG ATATCGACGG CTCCTTTACC
GACCACAGGT TGTCCATGCA CGGTGATGTG GTTCATTCTC GCCCCGTGGC GTTGAATTTC
GGAACCACGG TGGCGCCCAA GGTCGTCGTT TTTTACGGCG CCAACGACGG CTGGTTCAGG
GCGGTGAACG GCAATCGAGC GGACGCGATC GGCGCGGTTC CAGCCGGGGG CGAGCTTTGG
TCTTTCGCGC CGCCTGAGTT TCTGTCGAAG TTCTCCAGGC TCCGCGAAAA AACGCCGCTC
AACTACTATC TCAACACGCC GGCGACGGGC ACCCAGAAGA AGGACTACGC CATCGATGGC
CCAATCACCG CGTACCGAGG GACGATCGGC GCTTCAACCG CCACCAAGAC ATTCCTCTAT
GCCACCATGC GCCGCGGCGG AAGATCGATC TACGCGTTCG ACGTGAGCAA TGCCGACACC
GCGCCGACCA GCCCGTCGCT CAAATGGCGG ATCGGCTGCA CCGCGGACGG CACCTGCTCC
AGCGGCATGA GTGGCATCGG CCAGACCTGG GGCTCGATCA AGACGTTCAC GCACGGCAGC
TTCAGTTCCG GCAATACGCC CCTGCTGATC TTCGGCGGTG GGTACGATGC CTGCGAAGAC
TACGACCAGT TCAGCACGAC CGGCGCGAAC CACAACTGCA CGTCAAGTTC CACCGGCAAC
CATGTCTATA TCGTCAACGG CGACACGGGT GCCGTTGAAA AGAGCTTCGA TACCTCGGCC
TCGGTCCTGA CTTCGTTCAA CAAGTATCGC GGAGTCATCG CCGACATGGC CATCGTTTCG
GGCAGCGACG GTCATGCGAA ATACGCCTAC ATTGCCGACC TGGGCGGCAA CATATTTCGC
ATCACCATGA CCGGCGCCCC GTCAGCCTGG ACGATGAAGC AGATTGCGTC GTTCGGCTGC
GATACGACCA CCACCAGCTG CCCGGCGAAC CGCAAGCTGA TGTTCTCACC CAGCGTGGTG
AATACGGCGA CAGGCGAGTA CACGCTGCTG GTGGGCTCCG GCGACCGTGA GAAGCCGATC
ACCGGCTATA CGGCGGCAAC GGCGGTTACT AATTACTTCT TCATGTTCAA GGACAAGCCC
GATGACACCT CCTACCCTGG CACCACGGAT TGCGGGATCG CCGTGGTGTG CCTCAATTCC
CTGCTCAAGA TCGAGCGGGA CGCGGCGTCG CCCTCGAGCC TGGGAACCAA GAAGGGCTGG
TACCTGGCTC TTCATTCAAC AGAGCAGGTC GTGACCCAAC CCCTGACCAT ATTCAGCGTC
GTCACCTTCA GCACTCATGA GCCGGCTGTT ACGGGAGTCG TCAGTTCCGG CTCCTGTAGC
AATCTGGGCA CCACACGTGT CTACAACGTG GGCTATGAGT ACGCCAAACC CGTGGACGAC
CTTCGCTATG AGGACGTGGT GGGTGACGGC CTCCCGCCTT CGGCGACAGC GGGCCTAGTC
ACGCTCGACA CAGGCCAGAC CGTTCCTTTC TGCATTGGCT GTACCGGAGA CTCGCCTCTC
GAATCGAAGC AACCGACGAC CTCGTCTTCA AGCACCATGC CCAAGGGGCG CCTCTACTGG
TACCTTGAAA AGAAATGA
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| Protein sequence | MKQKIFQCIA VLLVFVAHVS TSLAEDIELF VGTPPTTAET PNVLIVLDNT ANWNTAFVNE
KAALVSVFQG MPVDKFRVGL MMFNETGGGN SGNDGAYVRA AARTITSSNK TAYANLIDSL
DITGDKSNGG KVAKAMMEAY YYLSGGTPHA GNQKNKTDYA LNTAGNASDD AMHALAGNAL
ASKNSTTYVK PGSGDCVKNY IIYISNGPAQ DNSSDIETAT TALAAAGGKT TAISLNPSGS
QDNPADEWAR FLKKSAIKGV VYTLDVNKGT SGQGPGWTAL LKSMASQSGG RYFDVSTSGI
ADAINSILSE IQSVNSVFAS VSLPVSVNTQ GTYLNQVFVG MFRPDGDSMP RWKGNLKQYK
MAFINNELKL VDADGTAAIN GQTGFITECA RSYWTPTTVD TEWNSAQESD CLTVAGAESS
NYPDGNVIAK GAQAYQLRLS STRTSLTCND ATCTSLVTFN NTNVSQTQLG VSTTTDRDNV
INWAGGMDNK DDEDIDGSFT DHRLSMHGDV VHSRPVALNF GTTVAPKVVV FYGANDGWFR
AVNGNRADAI GAVPAGGELW SFAPPEFLSK FSRLREKTPL NYYLNTPATG TQKKDYAIDG
PITAYRGTIG ASTATKTFLY ATMRRGGRSI YAFDVSNADT APTSPSLKWR IGCTADGTCS
SGMSGIGQTW GSIKTFTHGS FSSGNTPLLI FGGGYDACED YDQFSTTGAN HNCTSSSTGN
HVYIVNGDTG AVEKSFDTSA SVLTSFNKYR GVIADMAIVS GSDGHAKYAY IADLGGNIFR
ITMTGAPSAW TMKQIASFGC DTTTTSCPAN RKLMFSPSVV NTATGEYTLL VGSGDREKPI
TGYTAATAVT NYFFMFKDKP DDTSYPGTTD CGIAVVCLNS LLKIERDAAS PSSLGTKKGW
YLALHSTEQV VTQPLTIFSV VTFSTHEPAV TGVVSSGSCS NLGTTRVYNV GYEYAKPVDD
LRYEDVVGDG LPPSATAGLV TLDTGQTVPF CIGCTGDSPL ESKQPTTSSS STMPKGRLYW
YLEKK
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