Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2615 |
Symbol | |
ID | 4014725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2745945 |
End bp | 2746979 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637942277 |
Product | ribosomal large subunit pseudouridine synthase D |
Protein accession | YP_549429 |
Protein GI | 91788477 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0357699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.629555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATT CTGAACAAAG CAAATTGATT ATATCGGGCG CTGTTGCGGC CAATAGCCCC TCTGATGAGG CTCAGGATGA AGCTGACAGC AGTGTCGAGC TGGAGTTACG GCGGGTGATG GTTCCCGCGG GGAGTCATGG CGCACGCCTT GACCGGGCCT TGGCCGGCAT TGTGCCTGAG TTCTCCCGCA GCTATCTGCA ACAGCTGATC GAAGCAGCCG TGGTGCAGCT CAATGGCCGG GCAGTCACCA AGCCGTCGGC CAAGGTCAAG GCCGGCGATG AGCTCATCAT AGAGTTGCGG CCCACACCTC AAAGCCAGGC CTTCAAGCCG GAAGCCATGG CGCTGGACAT TGTGTTTGAG GATCCCTATC TGCTGGTAAT CGACAAACCG GCCGGCCTGG TTGTGCACCC CGCACCCGGT AACTGGAGCG GCACCCTGCT CAATGGCTTG CTGGCGCGTG ATCCCCAGGC GTCCTTTTTG CCGCGCGCCG GCATCGTGCA TCGTCTCGAC AAGGATACCA GCGGGCTGAT GGTGGTCGCC CGCCAGCGAC AGGCGATGGA TCAGCTGGTG AGCATGATCG CCGCCCGGAG CGTGAGCCGG GAATATATTG CGCTGGCCCA CGGTGCATGG CAGGGGGCAC GGACCCGGGA GGTGAGCGCG GCCATCGGCC GGGATCCCCG CAACCGCCTG CGCATGGCCG CCGTTGACCT GGAAAAAAAC GCCGGCAAGC CGGCCTTGAC GGTGATATCC CTGCTGCAAA ACGGCGAGCG GCATTGTCTG GTCAAGTGCA AGCTGCATAC CGGCCGCACC CATCAAATTC GCGTGCACAT GGCGCTTCTG GGTCACCCCT TGATATCCGA CGGGTTGTAC GGCGGGGCAG TTGCTGCGGG GTTGGAGCGC CAGGCGCTGC ATGCCTGCCG GCTGGCATTT GAACATCCCG TGACCGGTGC CCCGATGGAA TTCAGGTCGC CGCCGCCGCC TGATTTACGG GCGGCTATAG CGGATGTCGG CCTGATATAC AATCAAAGTT CGTAG
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Protein sequence | MTDSEQSKLI ISGAVAANSP SDEAQDEADS SVELELRRVM VPAGSHGARL DRALAGIVPE FSRSYLQQLI EAAVVQLNGR AVTKPSAKVK AGDELIIELR PTPQSQAFKP EAMALDIVFE DPYLLVIDKP AGLVVHPAPG NWSGTLLNGL LARDPQASFL PRAGIVHRLD KDTSGLMVVA RQRQAMDQLV SMIAARSVSR EYIALAHGAW QGARTREVSA AIGRDPRNRL RMAAVDLEKN AGKPALTVIS LLQNGERHCL VKCKLHTGRT HQIRVHMALL GHPLISDGLY GGAVAAGLER QALHACRLAF EHPVTGAPME FRSPPPPDLR AAIADVGLIY NQSS
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