Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_2144 |
Symbol | |
ID | 4015217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 2235275 |
End bp | 2235796 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637941814 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_548969 |
Protein GI | 91788017 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.547762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCT CACCGATTGC ACCGGGCACC CGGCCCGAGC TGGCGGCTAT TGAAGCCGGC ATTCAGGCCG AACGCGGCCG CGTGTCGCTG CTGTACCAGG TGCTGCTGAA CAGCCCGACA TTGGCACAGG GCTGGGAGGG CCTTTTGACC GCTGTACGCA ACCGCAGCAG CCTGCCCGCC GACCTGCGCG AGATGATTAT CCTGCGCGTT GCGGTGCTGA ACCGCGCGCC CTACGAGTTT GAGGCTCATG TCCCGCATGC ACTCAAGGCG GGTATGCCAC AGGAAAAAAT CGACGCCCTG CGTGACTTGC AGCGGCCAGA GGGGCTGACG GGATTTTCAG ATCAGGAACG CCGGGTGCTG GCGCTGACCG ACGCGATGAC ACGCGACATC GATGTGCCCG ACAGTGTGTT TGACCCGATC AAGCCCTGCT TCAGTGAGCA GCAGCTGATC GACCTGGTGG CCACCGTGGC CGCCTACAAC ATGGTGTCGC GTTTTCTGGT GGCCCTCAGG ATTGGGCACT GA
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Protein sequence | MRISPIAPGT RPELAAIEAG IQAERGRVSL LYQVLLNSPT LAQGWEGLLT AVRNRSSLPA DLREMIILRV AVLNRAPYEF EAHVPHALKA GMPQEKIDAL RDLQRPEGLT GFSDQERRVL ALTDAMTRDI DVPDSVFDPI KPCFSEQQLI DLVATVAAYN MVSRFLVALR IGH
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