| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_2056 |
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| Symbol | |
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| ID | 4015282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 2137328 |
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| End bp | 2138029 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637941728 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_548884 |
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| Protein GI | 91787932 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.134429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.162736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCA TGTTGCGCGT GCTGACCCTA TGCGTCGCCC TGGCCACCTT GGCCGCCCCG
GGCACGATGA TGGCTGCGCA GCCGCTGCCT GTGGCCGGAT CGCCTACTCC ACCTACTCCA
CCCACTACTA CGCGGCTGCA GGCGCGCAAG GCGATCGAGC ACCCCGAGCC CGCCGTCCGG
CGCGCTGCCG TCGTGCGCCT GGGCGAAGTC GGCGTCATGG CCGATGCCGA CCGGCTGGTT
GCCCACCTGG GAGACGATGA CGCGCCGGTG CGCGAACTCG CCGAAGCCGC GCTGTGGCAG
ATCTGGAGCC GCTCGGGCGA CCGCGCGATC GATGCCCTGC TCCTGCGCGG CGTCCAGCAG
ATGGAAGCGC ACCAACTGGT CGAGGCGGTG GCCACGTTTT CCGAGGTCAT TCGCAGAAAG
CCGGCTTTCG CGGAGGGCTG GAACAAGCGC GCCACTGTTT ATTACCTGCT CGGCCAGTAC
GAGCTGTCAA TCAAAGACTG CGACGAAGTC ATGAAACGCA ACCGCCACCA CTTCGGGGCG
CTCGCGGGTT ACGGGCAGAT GTACCTTGCT CTGGGTGACC CCGACCGCGC CCAGCCCTAC
CTGGAGCGCG CGCTCAAGGT GAACCCGAAC ATGGCGGGTG TGGCGGCGAC GATCCAGCTG
ATCGAGCAGC GCCGCGAAGC AAAGCGGCGC CGAACAATCT GA
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| Protein sequence | MSLMLRVLTL CVALATLAAP GTMMAAQPLP VAGSPTPPTP PTTTRLQARK AIEHPEPAVR
RAAVVRLGEV GVMADADRLV AHLGDDDAPV RELAEAALWQ IWSRSGDRAI DALLLRGVQQ
MEAHQLVEAV ATFSEVIRRK PAFAEGWNKR ATVYYLLGQY ELSIKDCDEV MKRNRHHFGA
LAGYGQMYLA LGDPDRAQPY LERALKVNPN MAGVAATIQL IEQRREAKRR RTI
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