Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1967 |
Symbol | |
ID | 4015373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 2035214 |
End bp | 2035945 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637941634 |
Product | hypothetical protein |
Protein accession | YP_548795 |
Protein GI | 91787843 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.445597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGGTC ATAGCAAATG GGCGAATATT CAACACCGTA AGGGTCGCCA GGACGAAAAA CGCCAGCGCG TCTGGACGCG CGTGATGCGG GAAATCATGG TCGCGGCCCG TATGGGTGGG GGCGACCTGG GAACCAACCC GCGACTGCGC CTGGCTGTTG ACAAAGCCAA GGCTGCCAAC ATGCCGGCTG ATAACGTGAA GTACGGTATC GCCAAAGCCA CCGGCAGCCT GGAAGGCGTT CACTATGAAG AAGTCCGCTA TGAAGGCTAC GGCTTTGGCG GGGCGGCCAT CATTGTCGAC TGCATGACGG ACAACCGGGT GCGCACCGTG GCGGAGGTTC GCCATGCGTT TTCCAAGCAT GGCGGCCACA TGGGGACCGA AGGTTCGGTG GCGTTTCAGT TCAAGCACTG CGGCCAACTG ATCTTTGCGC CGGGCACCAG CGAGGACAAG GTCATGGAAG TGGCGCTGGA AGCGGGTGCC GACGATGTGA TCACGCATGA CGACGGTGCC ATCGAGGTGC TGACGCCCTA CACCGATTTT GAAGCCGTCA AAAAAGCGCT GGAGGCTGCC GGGCTCAAGC CCGAGCTGGC CGAAGTCACC ATGCGTGCCG ACAACATGAT CGAGCTGACC GGCGAAGATG CCCGGAAGAT GCAAAAGCTG CTGGATGTGC TGGAAGACCT GGACGACACG CAGGAAGTCT TTCACAATGC CGCGCTGGAC GCATCTGAGT GA
|
Protein sequence | MAGHSKWANI QHRKGRQDEK RQRVWTRVMR EIMVAARMGG GDLGTNPRLR LAVDKAKAAN MPADNVKYGI AKATGSLEGV HYEEVRYEGY GFGGAAIIVD CMTDNRVRTV AEVRHAFSKH GGHMGTEGSV AFQFKHCGQL IFAPGTSEDK VMEVALEAGA DDVITHDDGA IEVLTPYTDF EAVKKALEAA GLKPELAEVT MRADNMIELT GEDARKMQKL LDVLEDLDDT QEVFHNAALD ASE
|
| |