Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1706 |
Symbol | |
ID | 4015647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1758797 |
End bp | 1760989 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637941378 |
Product | putative ATP-dependent exoDNAse (exonuclease V), alpha subunit |
Protein accession | YP_548540 |
Protein GI | 91787588 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.129548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTGC CAAGTGTCAC CGTGCGTATC AGTGCCGTGC GCAGCCAGAA CCCGTGTGGG CGGGGTGGCG CGATCTTCAC GGGCATCGAG GTGGACGACA AAGGCTGGCG CGTCGATGCC AAAACCCACT ACGTCATCAA AGCCTCCAGC CAATTGCTTC AGGCCCCGGT CGAATGCGGG CAACTGTGGC GCATTGCCGG CACACCCGAG GCCAACACCA TAGTCGTCAA TGGCTACCGG CTCACCGAAG CCACCATCAC GGCCGAATCC ATGGAAATGC TGCGCCCCTC GGGCGAGCAC ATCATTACGC TGCTTGGTCA GGGCGAAGCC TTCGAGGGCA TCGGCGAAGT CAAGGCAAGG CGCTTGTGGG AACACTTTGG CGATGCCTTG TACGACCTGC TCGACCGGTC GGACGTCGAC CGACTCGCAG AGGTACTGCC CAGGCCGATG GCGCAAAAGC TCGCGGATGC ATGGCAGCAG TGGGGCAACA CCTTTACCCT GCAATGGCTG CAGTCCAAGG GGTTTGCCGT AGCGCTCGGG CGCAAGGTAC TGGACTTCTT CGGCAAGGAC GCCGCCCGCA AGATCGAGGA CGACCCCTAT CGCCTGCTGA GCTTTGCCGC CAACTGGGCC ACCGTGGATG CCCTGGCGCA AGACACCTTC GGCCTCAGTC CCACCGACCC GCGACGTCTC GCGGGCTCGG TCGAGGAAGC GCTGTACGCC GCGTTTGACG CCGGCCACAC CTGCATCCCC GAGCTTGAGC TTGCGCGTCG CCTGCGCGTC TTGTTGCAGC GAAGCGATGT GCTGGGGTCG GCACTGGCGC AAGCCGAATC AGCGGGGCGG TTCATCCGCC ATGGCGAGCG ACTGCACGCG CCGGGCCCCT TTGTGATGGA GCAGGGCGTG GCCCAAGCCA TCGCCCGCCG CGCCGCCAAT CCAGACCCCT TGCTCGACGC CGACTCACTG GCGGAACTCA TCGCCGACTA TCAGGCACAA GCCGGCATCA GCTTGCATCA AAAGCAGGTC GAGGCGCTGG AACTGGCGAA TGCCAACCCG TTCTGCGTCA TTACCGGGGG CGCCGGCACC GGCAAGACCA CCGTGTTGCG CGGCTTGTTT CGCGTCTTTG AGGCGGCTGG CCACACGATC TACCCCATGG CGCTCTCCGG GCGTGCCGCC AAGCGCATTG GCGAGGCCAC CGGCCATGGC GCCCAAACCA TCGCCGGTTT CCTCAAGCAC TTCAATGCAG ATGATGCGCC TTCGAACGCG GTGGTGGTGA TCGATGAGGC CTCGATGGTG GATTTGCCGT CCGCTTATCG GGTGATCCGG CATCTGCCGC TCCACTACCG TGTGGTATTG GTCGGTGACC CGAACCAACT GCCACCGGTT GGGCCAGGCT TGCTGCTGCA TGAACTGGCG CATCAACCCC AAGTTCCCGT CGTGGAACTC TCGCAGGTCA AGCGCTATGG CGGGGCGATT GCCGAGGCCG CCGCCCTGAT CCGCGACGGC GAGTGGCCCG ATTTGCCCGC CGACGCTCTC GCCGACATTG CCTTCCTGGC ATGTCCACCG GATCAGATCA ACGAAGTCGT GCTGCGTCTG TACGACCAGG ATCGCAGTGC CAGTCAGATT CTGTGCGCCA CGCGCAATGC CGCAGCCGGT GGCATGAATG CCATCAACGC GCTGTGCCAG CGCCACACCA ACGCCCACGG TGAAGGGCTG ATGCACTGGA ACCTGGAATT CGACCAGCCG CAAGGCACTG GTATACGCGT GGGCGATCCT GTCATCTGTC TGCGCAATGA CTGGGAGATC GATTTGCAGA ACGGCTCACT CGGCGTCGTG CTGTCCGTGG AGCCACCCGT GCCGGACATT GCGCCGGAGC GCCGCCTTGG GCGCATCCTG TGGGATGACG GACGCACGCG TGACCTGACC CCTGAGTTGC TGGCGCATCT GGAACTGGCC TACGCCATCA CCATTCACAA GGCGCAGGGC AGCGGCTTTC AGCGGGTCAT CATTCCTGTG CGCCAGAGCA AGCTGCTGGA TCGCACGCTG CTGTACACCG CCGTGACGCG GGCAGAGCAA CAGGTGATTC TGGTCGGCGA CGTGGAAGCG GCCAAAACAG CCATACGAGC GCCGCGCCAT TCGGATCGCC GGCATGTCGC GTTGGGCGCG TTGCTGCGTG AGCAGTTCGA GAGGATGGTC TGA
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Protein sequence | MNVPSVTVRI SAVRSQNPCG RGGAIFTGIE VDDKGWRVDA KTHYVIKASS QLLQAPVECG QLWRIAGTPE ANTIVVNGYR LTEATITAES MEMLRPSGEH IITLLGQGEA FEGIGEVKAR RLWEHFGDAL YDLLDRSDVD RLAEVLPRPM AQKLADAWQQ WGNTFTLQWL QSKGFAVALG RKVLDFFGKD AARKIEDDPY RLLSFAANWA TVDALAQDTF GLSPTDPRRL AGSVEEALYA AFDAGHTCIP ELELARRLRV LLQRSDVLGS ALAQAESAGR FIRHGERLHA PGPFVMEQGV AQAIARRAAN PDPLLDADSL AELIADYQAQ AGISLHQKQV EALELANANP FCVITGGAGT GKTTVLRGLF RVFEAAGHTI YPMALSGRAA KRIGEATGHG AQTIAGFLKH FNADDAPSNA VVVIDEASMV DLPSAYRVIR HLPLHYRVVL VGDPNQLPPV GPGLLLHELA HQPQVPVVEL SQVKRYGGAI AEAAALIRDG EWPDLPADAL ADIAFLACPP DQINEVVLRL YDQDRSASQI LCATRNAAAG GMNAINALCQ RHTNAHGEGL MHWNLEFDQP QGTGIRVGDP VICLRNDWEI DLQNGSLGVV LSVEPPVPDI APERRLGRIL WDDGRTRDLT PELLAHLELA YAITIHKAQG SGFQRVIIPV RQSKLLDRTL LYTAVTRAEQ QVILVGDVEA AKTAIRAPRH SDRRHVALGA LLREQFERMV
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