Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1440 |
Symbol | |
ID | 4011315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1488892 |
End bp | 1489713 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637941119 |
Product | extracellular solute-binding protein |
Protein accession | YP_548286 |
Protein GI | 91787334 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.506156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.1259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCCAG GGCTGGCCCA TCGCAACCGC GGCATGGATT TTTTTGACAT TACAGAACGG AAACTCACCA TGAAATTCGC AACGCTTGCA ACTTCTCTTG CCGTCACCTT TGCACTATCG CTGTCAGGCC CGGCTTCGGC GCAGACGGTG CTGAAGGTCG GATCCACGCC GACCGGCAGC CCTTTCACTT TCCTGGACAC CAAGACCAAC ACCATTGACG GCGTGATGGT CGACATCGTC AATGCGGTGG CCAAGGAATC GGGCTTCGGG GTACAGATCG AACCCATGCA GTTCTCGGCG CTGATCTCCT CGCTGACTTC CAAGCGCATC GATTTGATCT CGGCGGCGAT GTTCATCACG CCGACGCGCC AGGAAGTCGT GGACTTTTCG CTGCCGATCT ACAGCTACGG CGAAGGCGTG GTTGTGTTGA AGCAGGACAC GGTCGCCTAC CAGAGCTTCG CCGACATGAA AGGCAAGCGG GTCGGGGTGC AGGTCGGCAC GGCCTTCGTG GAACCGTTGC AAAAGAGCGG GATGTTTTCA GAGGTCAAGC TCTACGAAAC CACGCCCGAC CTGATGCGCG ACGCCAACGC CGGGCGCATC GACGCGGGCG TGCTGGACTA CCCGATTGCC GCCTTCGCCG TGGCCAAGGG ACAGTTTCCC AACCTGCGCA TGGTCACCAG CTTCAAGCCG ACCATGGTCA ACAGCATCGG CATGGCCACC CGAAAAGGCG ACACCGAGCT GATGGGCAAG GTGAATGTCG CCGTGACCAA GCTCAAGGCC AACGGCACCA TTGACGCCAT CCTGAAAAAG TGGGGCCTGT GA
|
Protein sequence | MPPGLAHRNR GMDFFDITER KLTMKFATLA TSLAVTFALS LSGPASAQTV LKVGSTPTGS PFTFLDTKTN TIDGVMVDIV NAVAKESGFG VQIEPMQFSA LISSLTSKRI DLISAAMFIT PTRQEVVDFS LPIYSYGEGV VVLKQDTVAY QSFADMKGKR VGVQVGTAFV EPLQKSGMFS EVKLYETTPD LMRDANAGRI DAGVLDYPIA AFAVAKGQFP NLRMVTSFKP TMVNSIGMAT RKGDTELMGK VNVAVTKLKA NGTIDAILKK WGL
|
| |