Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1385 |
Symbol | |
ID | 4011899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1421357 |
End bp | 1422562 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637941065 |
Product | D-amino-acid dehydrogenase |
Protein accession | YP_548232 |
Protein GI | 91787280 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.71736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCT GCGTTATCGG CGCCGGCATC GTGGGCTGCT CGACGGCCTA TCAATTGGCC CGCATGGGGC ATGAGGTGCA CCTCGTGGAT GAGGCCGCCG GTCCGGGCCT GGGAACGAGC AACGCCAACG GGGCCCAGCT CAGCTACAGC TATGTGGAGC CACTGGCCTC ACCGCACACC CTGGGCGGAC TTCCCGGCAT GTTGCTTTCA CGCGGGTCGC CCCTTCGGTT CCGGCCCAGG CTGGATTGGA GGCAGTGGTA CTGGGGCTTC CAGTTTCTCA AGGCATGCAC CGCAAAACAG GTTGAAAGCG GGACCCGAAC ACTGCTGCAG CTATCGCAGC TCAGCCGCGA CACGCTGATG AGATGGATGG AAAGCGAGGA TTGGTCGTTT GATTACAAAA TCAACGGGAA GCTGGTCCTT TGCCCCACCC GGGACTGCCT GAAACGCCAG GAAGCGCAGA TCAAATTCCA AAGCCAGTTC GGATGCCATC AGAAAATTCT GGGCGTGCGG GAATGCGTTG AAAAAGAACC CTCATTGCAA AGCTACTCCG GGAAATTCGC CGGCGGCGTG TGGACTGCCG AAGAGCGGGT GGCCGACCCT TACAAGCTCT GCCAGGAGCT GCTCCGAAGC TTGGTGCGCA TGGGTGCGAA TGTTTCGTTC AATGCCAGGG TGAATGACTT TGTCACTTCG GGTGAGCGTC TGGATACCGT TCGCACCAGC AAAGGCGACC TGAGGTCCGA CGCCTTCGTG CTGGCCACCG GCGTGACGGC CCCAGCTCAT GCGTCGAAAC TCGGTATTTA CCTTCCTGTT TACCCCCTCA AGGGCTACAG CATCACGCTG CCGATCAAGG GTGGGCGCCA GGCGCCAAAA GCCAGCGTCA CGGATCTTTC TCTCAAGACA GTTTTTGCTC CCCTCGCACA AAACCTGAGA GTGGCCGCGA TGGCCGAGAT CGGCGGCCAT GATCTTTCCA TTCCGGGTGA CCGCATCAAG CAAATGGTGG CGTCGGTTGA ATCTGTTTTT CCTGGCCTAT GCGATTTGTC GTCCACTCGC CCCTGGGCGG GTTTACGGCC TGCCACGCCG ACCTCCGTCC CAATCGTAGG GCGCTCCAGG TTCAAAAATC TGTTCTTGAA TGTTGGGCAT GGTGCACTCG GGCTAACGCT CGCGGCAGGC AGTGCGGTAG CTATATCTCA AGAAATTTCG TCATGA
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Protein sequence | MKVCVIGAGI VGCSTAYQLA RMGHEVHLVD EAAGPGLGTS NANGAQLSYS YVEPLASPHT LGGLPGMLLS RGSPLRFRPR LDWRQWYWGF QFLKACTAKQ VESGTRTLLQ LSQLSRDTLM RWMESEDWSF DYKINGKLVL CPTRDCLKRQ EAQIKFQSQF GCHQKILGVR ECVEKEPSLQ SYSGKFAGGV WTAEERVADP YKLCQELLRS LVRMGANVSF NARVNDFVTS GERLDTVRTS KGDLRSDAFV LATGVTAPAH ASKLGIYLPV YPLKGYSITL PIKGGRQAPK ASVTDLSLKT VFAPLAQNLR VAAMAEIGGH DLSIPGDRIK QMVASVESVF PGLCDLSSTR PWAGLRPATP TSVPIVGRSR FKNLFLNVGH GALGLTLAAG SAVAISQEIS S
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