| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1030 |
|---|
| Symbol | |
|---|
| ID | 4012151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1056668 |
|---|
| End bp | 1057381 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637940708 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_547881 |
|---|
| Protein GI | 91786929 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.48599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.150605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAA AATTCGAAAT AGAGATGCCG AAGTCGCTGA CGGAGATTGT TGCGCAGCGC
GTGCGGCAGG CGATTATTGA CGGAGAGTTT GCCTTGGGCC AGATGATTTC GGAAGAAACC
CTGGCCGAAT CGTTTGGCGT CAGCCGCACG CCCGTGCGTG ACGCGCTGAC GCTGCTGCAA
ACCACCGGGC TGGTGGACAT CCGCTCCAAA CGCGGCAGCT TTGTCTTCCA GCCCGACGAA
GATGACGTGC GCGCCATCTG CGACTTCCGC GCCACCCTGG AGCTACACGC CGCCAAGCGC
TCCCGCGCCG TGAACCGGCA GGCCGCCATT GCCGCGCTGG AAGCGGTTTT TGCGCAGATG
GTGGCCGCCA GCGAAGCCGA CGACGAGATC GGCTATGGCC ACTGCGACTC GGCTTTTCAC
GAAGCGCTGT TCACGCATTG CGGCAACCCT TATGTGGTCA ATGCCTACGC GCTCGTTTCT
GGCAAGATCG CCGCCCTGCG CACCAACATG GCCAAGCAGT TTTCCGATGC GCGCAAGGTG
TCGCTGCAAG AGCACCGCGA AATGATCCAG TACATCGACG ACGGCGACTT TGACCGGCTG
GAGCAACTGA TCCAGAGCCA TGTGGGCAGG ACGGTCGAAG CCTTTCGCCT GGCCAGTGCT
GCGGCGCTGA AAGCCGCCCC CGCGCCTATC AAACTGAACG TCGCAGGCAC CTGA
|
|---|
| Protein sequence | MAKKFEIEMP KSLTEIVAQR VRQAIIDGEF ALGQMISEET LAESFGVSRT PVRDALTLLQ
TTGLVDIRSK RGSFVFQPDE DDVRAICDFR ATLELHAAKR SRAVNRQAAI AALEAVFAQM
VAASEADDEI GYGHCDSAFH EALFTHCGNP YVVNAYALVS GKIAALRTNM AKQFSDARKV
SLQEHREMIQ YIDDGDFDRL EQLIQSHVGR TVEAFRLASA AALKAAPAPI KLNVAGT
|
|---|
| |