| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1003 |
|---|
| Symbol | |
|---|
| ID | 4012376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 1018862 |
|---|
| End bp | 1019509 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637940682 |
|---|
| Product | Sua5/YciO/YrdC/YwlC |
|---|
| Protein accession | YP_547855 |
|---|
| Protein GI | 91786903 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.936359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000222561 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGT TTTTCGAAGT TCATCCCGAC AACCCCCAGC TGCGGCTGCT CAAGCAGGCG
GTGAACCTGC TGGCGCGCGG GGGCGTCGCC GCCGTACCCA CCGACTCCAG CTACGCGCTG
GTCTGCCACC TGGACGACAA GGCCGCGGCC GACAGCCTGC GCCGTATTCG CGGGGTGGAT
GACAAGCACC ATCTCACGCT GCTGTGCCGC GACCTGAGCG AGCTGGCCAA CTATGCACGC
GTCGACAACA AGCAGTTTCG CCTGCTCAAG GCGGCCACGC CCGGGCCCTA CACCTTCATC
CTGGAAGCCA GCAAGGAAGT GCCGCGGCGT CTCAGCCACC CGTCGCGCAA GACCATAGGC
CTGCGCGTGC CGGGGCACAA GACCCTGCAG GCCCTGCTGG AGCTGCATGG CGCGCCCTTG
CTGGCCACCA CGCTGATACT GCCCGGCCCC GACAATCCGC CCCACGAACC ACTCAACGAT
GCACGCGACA TCCGCGACCA GCTGGAGCAT GAACTGGCCG CCGTGATTGA TGCAGGCGCC
TGCCACCAGG CGCCCACCAC CGTGATCGAC CTCACCCCCA TGGGCGAGGG CGGCGAGCCG
GTGGTGGTCC GCCAGGGCCG CGGCGACCTG GCTGCGCTGG GCCTGTGA
|
|---|
| Protein sequence | MAQFFEVHPD NPQLRLLKQA VNLLARGGVA AVPTDSSYAL VCHLDDKAAA DSLRRIRGVD
DKHHLTLLCR DLSELANYAR VDNKQFRLLK AATPGPYTFI LEASKEVPRR LSHPSRKTIG
LRVPGHKTLQ ALLELHGAPL LATTLILPGP DNPPHEPLND ARDIRDQLEH ELAAVIDAGA
CHQAPTTVID LTPMGEGGEP VVVRQGRGDL AALGL
|
|---|
| |