Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0823 |
Symbol | |
ID | 4011381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 845603 |
End bp | 846370 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637940501 |
Product | cytochrome c1 |
Protein accession | YP_547677 |
Protein GI | 91786725 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.862192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGATTTCTAA CGCGATTTTT GCCCTGATCA CGGCGGTGGG CCTGATGGCC GGCGCACAGG CTTCGGAAGG TGGCATGGCC TGGGACAAGG CGCCCGGCAA GGTCAACGAC ATGGCCACCC TGCAGAGCGG CGCCAGGCTG TTTGTCAATT ACTGCCTGAG TTGCCATTCG GCCGCCTACA TGCGTTACAA CCGCCTCACG GACATCGGTC TGAGCGAGCA GCAGATCAAG GACAACCTGC TGTTCACCAC TGAAAAAGTC GGTGAAACCA TGAAGGCCGC GATCGACCCG AAACAGGCCA AGGACTGGTT CGGCGGCAAC CCGCCAGACT TGAGCGTGAT TGCGCGCTCG CGCTCCGGGG CAAATGGCAC CGGTGCCGAC TATCTCTACA CCTACCTGCG CACCTACTAC CGCGACGAGA CCAAGGCTAC GGGCTGGAAC AACCTGGCTT TCCCCAGTGT GAGCATGCCG CATGTGCTGT GGGAGCTGCA GGGCGAGCGC AAGCCGGTCT ACCTGGAGAA GGAAGAGCAC GGCCACAAGG TATCCATCTT CAAGGGCTGG CAGCAGGTCA CGCCCGGCAC CATGACGCCG TTGCAATATG ACCAGGCCAT GGGCGACCTG GTGGGCTTCC TGCAATGGAT GAGCGAACCG GTCCAGAACA CGCGCGTTCG TGTGGGCGTG TGGGTGCTGA TTTTCCTTCT TGGCATGACC TTTATCGCCT GGTGCCTGAA TGCGGCGTTC TGGAAAGATA TCAAGTAA
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Protein sequence | MKKLISNAIF ALITAVGLMA GAQASEGGMA WDKAPGKVND MATLQSGARL FVNYCLSCHS AAYMRYNRLT DIGLSEQQIK DNLLFTTEKV GETMKAAIDP KQAKDWFGGN PPDLSVIARS RSGANGTGAD YLYTYLRTYY RDETKATGWN NLAFPSVSMP HVLWELQGER KPVYLEKEEH GHKVSIFKGW QQVTPGTMTP LQYDQAMGDL VGFLQWMSEP VQNTRVRVGV WVLIFLLGMT FIAWCLNAAF WKDIK
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