| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0610 |
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| Symbol | |
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| ID | 4011245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 617471 |
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| End bp | 619867 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637940292 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_547468 |
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| Protein GI | 91786516 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000874993 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGGG GGCGTTGCCG GCTTTTACAT GTGCGCGCCT GCCTTGTCAT GGCAAGTCTC
TGCGCGGGCG CCGCAGCGCA GGGCCAGACC ACACCGCCGT CCAACGTTCC GGCCACTGCC
CGGTCAGCCA ATGACCGGCT GCTTCCGCTG GAAGTGTTCA TCAACAACAC CAAAGGCGGC
GTCTGGACCC TGCTCGAGCG CAATGGCATT TTGTATGCGC CGTCAGACGC CTTCGACGAG
TGGCGCCTGA ACCACCAGCC CAGCGCCCAG GACATCCAGT TTCAGGGCCA GCAGTGGTAC
CCGCTTTCGG CGATTCCGGG ATTTGAAGCG CGACTCAACT TTGCCACCCA GTCGGTCGAT
CTGGTGTTTT CGCCGGCGGC CTTCAACGCC GTGCGCCTGA CGCAGGAAGC CGCACTGCGC
CCCCCGCTGT CGCCCACCAT TCCCGCCGTC TTTGCCAACT ACGACCTGAA CTACACCACC
AGCCGCAGCC GCGTCACGGG CAGCGATGAC TTGCGCACCA AGGACCTGGG CGCCTTGACG
GAGCTCGGGT TTTCGGGGCA ATGGGGCCTG GTGACCAGCA GCTACGTTGG CCGCAACCTG
GTCAGCCAGG ACCCCACGCT CAATGCCTCG TGGCGGCGGC TGGAGACCAC CTACACCCGG
AACTTCCTGG ACAGCAACAG CACGCTGCGG CTGGGCGACA GCATCACGCG CACGGGCATC
TCGGGCCGCT CCGTTTACTT TGGCGGCTTT CAGTTCGCCA AGAATTTTGC CCTGCAACCG
GGCTTCGTGA CGCAGCCCAT CCCCACCGTC ACCGGGCTGT CTGCCGCGCC CAGCACCGTG
GAGCTGTATG TCAATGATGC GCTCCGGCAA ACCTCCCGGG TGCCCTCGGG GCCCTTCAGC
ATCGACAACT TCCCGGCACT GACGGGCGCG GGCGAAGCGC GGGTCGTGGT GCGCGACATC
CTGGGCCGCG AAACCGTGAT CACCCAGTCC TTTTTCAGCA ATGCCAATCT GCTGGAGGAG
AACCTGACGG ACTGGAGCTT CGAGCTGGGC GCCGTCCGCA ACAACCTGGG CACTGACAAT
GCCAACTATG GCCCGCGCTT CATCGCCGGC CTCTGGCGCA AGGGGCTGAG CAAGAGCCTG
ACGGTGGAAG GCAACGGGGA GTGGTCCTCC TCGCTGAGCC GTGCGGGCGC GGGTGTGAGC
TACGCGCTGC CGTTCCAGAT GCTGGGCCAA ACCGCACTGG CGGTGAGCCG CAGCGACACG
GTTGGCAATG GCCACAACTG GCTGGTCGGC GTAGAGCGCA GCGGCCTGCG CCACGGCGTG
GCCTTCAGCG CGCAAGGCGC ATCGCGTGGC TACCGGCAGC TCGGTATTGA CACGGCATCG
CCCCGCCTGC AAACCACCGC CAGCTACAGC TACAGCAGCG ACAAGTTCGG GGCGTTGAAC
CTGAGCTATG CCGGCTTTGA CAATTACGAG CTGGGCAAGC TCAATACCGT GAGCCTGAGC
TACACCATCC GGCTGGGGCA GCGCAGCGCC CTGACGTTGA GCGCCACCCG GCTCAGCGGC
GTGTCTTCCG GCAATTCGCT CGGTGCGTTC CTGATCGTGC CGCTGGACAA CCGCATCACG
ATCGCCTCCG GTGCGACCCG CCGAAGCGGC AGCACCGACA GCTATGTGAA CGCCAGCCGG
GCCCTCAGTG CCGAAACCGG CTGGGGCTGG CGAACCGCGC TGGGCTCGCG CGTCGACGGA
GGCTACGCCG AGGGCGGCGC TTATTACCAG GGAACCAAAG GACTGTTCTC AGCCGACGTC
AGTGGTGCGA AAAACCAGCA GAACGTGCGC CTGGGCCTGC TCGGCGGCGT CGTCATGGCC
GATGGGCAAG TCTTCGCCAC ACGCCGCGTG CAAGACAGCT TTGCGATTGT CGAAGTACCG
GGCTATGCGA ATGTGGGTGT GGGCTTTCAG GGCAGCACGC TGACCCGCAC CAACAGCAGC
GGCGTAGCGC TCCTGCCGCG CCTGCTGCCG TTCCAGCGCA ACAGCGTGCG CCTGGATCCG
ACCGAACTGC CGATCAGCGC CGAGCTGGAC TCAATTGAAC AGGAAGCCGT GCCGGCCCTG
CGCAGCGCGG TCAAGATCAC CTTCCCCGTG CGATCCGGCC GGGGCGCCTT GATCCGCATT
GAATTCGACG ACGGCGAACC CGCGCCCGCC GGTGCAGAAA TCGAACTGGT GGGCGACAAA
AAGGAATTCT TTGTCGCCCG GCGTGGGGAG GCTTTTGTTA CCGGCCTGCA ATCTGCCAAC
CGTTTGCGGC TGAAGTGGAA CGGCAACAGC TGTACCTTCG ACGTGGCCTT GCCGCCCGGC
AATCTGGAGG ACATCACCCG GGTGGGCCCC GTCCGCTGCA TCGGCGTCAA ACGGTGA
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| Protein sequence | MTRGRCRLLH VRACLVMASL CAGAAAQGQT TPPSNVPATA RSANDRLLPL EVFINNTKGG
VWTLLERNGI LYAPSDAFDE WRLNHQPSAQ DIQFQGQQWY PLSAIPGFEA RLNFATQSVD
LVFSPAAFNA VRLTQEAALR PPLSPTIPAV FANYDLNYTT SRSRVTGSDD LRTKDLGALT
ELGFSGQWGL VTSSYVGRNL VSQDPTLNAS WRRLETTYTR NFLDSNSTLR LGDSITRTGI
SGRSVYFGGF QFAKNFALQP GFVTQPIPTV TGLSAAPSTV ELYVNDALRQ TSRVPSGPFS
IDNFPALTGA GEARVVVRDI LGRETVITQS FFSNANLLEE NLTDWSFELG AVRNNLGTDN
ANYGPRFIAG LWRKGLSKSL TVEGNGEWSS SLSRAGAGVS YALPFQMLGQ TALAVSRSDT
VGNGHNWLVG VERSGLRHGV AFSAQGASRG YRQLGIDTAS PRLQTTASYS YSSDKFGALN
LSYAGFDNYE LGKLNTVSLS YTIRLGQRSA LTLSATRLSG VSSGNSLGAF LIVPLDNRIT
IASGATRRSG STDSYVNASR ALSAETGWGW RTALGSRVDG GYAEGGAYYQ GTKGLFSADV
SGAKNQQNVR LGLLGGVVMA DGQVFATRRV QDSFAIVEVP GYANVGVGFQ GSTLTRTNSS
GVALLPRLLP FQRNSVRLDP TELPISAELD SIEQEAVPAL RSAVKITFPV RSGRGALIRI
EFDDGEPAPA GAEIELVGDK KEFFVARRGE AFVTGLQSAN RLRLKWNGNS CTFDVALPPG
NLEDITRVGP VRCIGVKR
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