Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0478 |
Symbol | |
ID | 4011501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 494486 |
End bp | 495568 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637940163 |
Product | ABC transporter related |
Protein accession | YP_547340 |
Protein GI | 91786388 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0124436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCTGG CACTTGACCA CATCAGCAAG AAAGTCGGCG CGGAGCACTG GTTGTACGAG TTAAGTCTGG CACCGCGCAG TGGCGAGGTG ACGGTGCTTT TGGGCGCCAC GCAAGCCGGC AAGACCAGTC TGATGCGCAT CATGGCGGGG CTGGATGTGC CCACCAAAGG CCGGGTGCTG GTGGACAACG CCAACGTCAC CGCAACGCCG GTGCGCGAAC GCAATGTCGC CATGGTGTAC CAGCAGTTCA TCAACTACCC GTCGCTCAAG GTGTTTGACA ACATCGCATC CCCGCTCAGG CTGCGCGGCG AGCCCAACAT TGACCAGCAG GTGCGCAGCC TGGCCGGGCG GCTGCATATC GAGATGTTTC TGGACCGCTT GCCGGCCGAA CTTTCCGGCG GCCAGCAGCA GCGCGTGGCC CTGGCGCGGG CCCTGGCCAA GGGCGCGCCC CTGATGCTGC TTGATGAGCC GCTGGTGAAT CTGGACTACA AGCTGCGCGA AGAACTGCGC GAAGAGTTGA CGCAGTTGTT TGCCGCCGGC GATTCGACCG TGATTTACGC CACCACCGAG CCCGGCGAAG CCTTGCTGCT GGGCGGCTAC ACCGCCGTGA TGGATGGCGG TGAGCTGCTG CAGTACGGGC CAACGGCAGA GGTGTTTCAT ACGCCCCAGT CGCTGCGGGT GGCGCGTGCC TTCAGCGACC CGCCGATGAA CCTGATTGCC GCGCTGCCGG TAGGGCAGGG CGTGCAACTG GTGGGCGGGC CGGTGCTCAG GATGGCTGTG CCGTCCGTGT CGGCACAGCG CCTGGCGACG CTGACGGCAG GCATTCGCGG CAGTGCACTG CGCATCGAGG AGCGCGCGGG CGATGTGGTG CTTGCGGGCA GGGTCGAACT GGCAGAGATC TCCGGGTCTG ACACCTTTGT GCACGTCGCC ACGGCGGCCG GTGAACTGGT GGCTCAGCTG ACGGGCGTGC ATTACTTTGA TCTGGGGGTG CCGCTGACGC TGTACCTGGA TCCCGCCCAA GCCTATGTGT TTGATGCGGC CGGTGCGCTG CTGGTCGCGC CCGGGCGCAA GGGGGGGCGT TGA
|
Protein sequence | MQLALDHISK KVGAEHWLYE LSLAPRSGEV TVLLGATQAG KTSLMRIMAG LDVPTKGRVL VDNANVTATP VRERNVAMVY QQFINYPSLK VFDNIASPLR LRGEPNIDQQ VRSLAGRLHI EMFLDRLPAE LSGGQQQRVA LARALAKGAP LMLLDEPLVN LDYKLREELR EELTQLFAAG DSTVIYATTE PGEALLLGGY TAVMDGGELL QYGPTAEVFH TPQSLRVARA FSDPPMNLIA ALPVGQGVQL VGGPVLRMAV PSVSAQRLAT LTAGIRGSAL RIEERAGDVV LAGRVELAEI SGSDTFVHVA TAAGELVAQL TGVHYFDLGV PLTLYLDPAQ AYVFDAAGAL LVAPGRKGGR
|
| |