| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0153 |
|---|
| Symbol | |
|---|
| ID | 4012121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 163013 |
|---|
| End bp | 163594 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637939837 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_547016 |
|---|
| Protein GI | 91786064 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGATGT TGCAGGCGCG CGAGGAGGCG ATTGTCCAGG CCACCAATCG CCTGCTGGCC
GAAAAAGGCT TCGACCTGAT GACGGTTGAC GAGGTTGCCG CCGAAGTCGG TATTGCCAAG
GCCAGTCTTT ACAAGCACTT TTCCAGCAAG GAAGACCTCG CGGCGGCCGC CATGGTGCGG
GTGTTGGGGC ATGCCCGGAC GTTTCTGGCC GGGCTGGCCG CCGACGCGCG GCCGATCGAG
CAGCTCAAGG CCGTGGTGCG CTGGATGATG CAGATGCGGC TGGCCGGCGA GATGCCCTCC
CTGCCCAGCC AGAACTCCAG CCTGCGTGCG GCGCTGATGG CCAACAAGGC CTATCTTGAC
GGGTTGATGG TGATCAGCGA CCAGATCGGC GGCTGGATTG AACAGGCGCA GCAGGATGGC
AGTCTGAACC CGGCCTTGCC CCCCATTCTG GTGCTCTACA CGCTCTATGC GCGGGCCTGC
GACCCGGTGC TGGAGTTTCT GAAGGCCGGT GGACAGCACA GCGACGCGGA GATCGTCGAG
CTGGTGGTGG GCACCTGTTT CGAGGGGTTG AGCAGTCGGT AA
|
|---|
| Protein sequence | MQMLQAREEA IVQATNRLLA EKGFDLMTVD EVAAEVGIAK ASLYKHFSSK EDLAAAAMVR
VLGHARTFLA GLAADARPIE QLKAVVRWMM QMRLAGEMPS LPSQNSSLRA ALMANKAYLD
GLMVISDQIG GWIEQAQQDG SLNPALPPIL VLYTLYARAC DPVLEFLKAG GQHSDAEIVE
LVVGTCFEGL SSR
|
|---|
| |