Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0094 |
Symbol | |
ID | 4012255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 98341 |
End bp | 99714 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637939780 |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_546959 |
Protein GI | 91786007 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGACA ACCGCTGGCC GGACGGCCTG CTGCTCGCCT ACTACGGCGA CGACTTCACC GGCTCCACCG ACGTGATGGA GGCCTTCAGC GCGGCTGGCG TGCCGACCGT GCTGTTCCTG CGCCCGCCCA CGGCAGACTG GCTGAAGCGG TTTCCCGAGG TGCGCTGCGT CGGCCTGGCC GGCCAGTCGC GCGGCCGCAG CCCGGACTGG ATGGACCGCG AGTTGCCGCA GGCCTTCGCC AGCCTGGCCA AACTCGGCGC GCCGATTCTG CAATACAAGG TCTGCTCGAC CTTCGACTCC TCGCCCGCGG TGGGTTCGAT CGGCCGCGCC ATCGATATCG GCGTGCCGCT GATGCCGGGC AACTGGTCGC CCATGGTGGT CGGCGCGCCG CGCCTGAAGC GCTACCAGGC CTTTGGCAAC CTGTTCGCGG CGGTCGACGG CGTGGGCTAC CGCCTGGACC GGCACCCGAC CATGTCGCGC CACCCGGTCA CGCCCATGGC CGAGGCTGAC CTGCGCCTGC ATCTGGCGGC GCAGACACCG CGCCGCAGCG AGCTGATCGA CATGGTGCAG CTGCGTACCG GCGACGCGGC CGCCCGCGTG CAGGCGCTCG CCGGTGCCGA CGTGCCGGTG GTGCTGCTTG ACGTGCTTGA CGAAGAAACA CTGGCTGCGG CCGGCCGCCT GGTCTGGACG CAGCGCGGCC GTGGCCTGTT CACGGCCTCG TCATCCGGCC TGCAGTACGC GCTGGCCGCG CACTGGCGCA GCCAGGGCCT GTTGCCGGAG CAGCCTTCGC TGCCGGTGGC GGCACCCGTG CCGGTGATTG CCGTGGTCAG CGGCAGTTGC TCGCCGGTGA CGGCGGCGCA GATCGCCTGG GCGCAAGGGC AGGGCTTTCA GGCCGAGCGC CTGAATCTGC CGCGCCTGCT CGACGCACGC GAGAGCGAGG TCGAGATAGA GCGCGTGGTG GCCGCCGCCG TGGGGGCCAT AGCGCTGGGC GTCAGCCCGC TCGTGTATTC AGCCGCCGGG CCCGACGACG CAGCGGTGCG CCAGTTCGAT GCGACGGCCA CGCAAGCCGG CCTGGCCCGC GGCGAGGCGG CGCAGCGCGT CGGTGAGGGT CTTGCCGAAG TGATGCGGCG GCTGCTCGAG CGTGCGCCCT TGCAGCGCAT TGTGGTGGCT GGTGGCGACA GTTCGGGCGA GGTGGCGAGC GCGCTCGACA TCACCGCGCT CAGCGTGGTG GCCGGGCTCG CGCCGGGCGC ACCGCTGTGC AAGGCCTGGT CCGAGCGCCG CGAACGCGAC GGCCTGGAGA TTGTGCTGAA GGGCGGCCAG ATGGGCACGG CCTCGTTTTT CGGCGCCGTG CGTGCCGGCC GTTTGCTCGA CTAA
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Protein sequence | MADNRWPDGL LLAYYGDDFT GSTDVMEAFS AAGVPTVLFL RPPTADWLKR FPEVRCVGLA GQSRGRSPDW MDRELPQAFA SLAKLGAPIL QYKVCSTFDS SPAVGSIGRA IDIGVPLMPG NWSPMVVGAP RLKRYQAFGN LFAAVDGVGY RLDRHPTMSR HPVTPMAEAD LRLHLAAQTP RRSELIDMVQ LRTGDAAARV QALAGADVPV VLLDVLDEET LAAAGRLVWT QRGRGLFTAS SSGLQYALAA HWRSQGLLPE QPSLPVAAPV PVIAVVSGSC SPVTAAQIAW AQGQGFQAER LNLPRLLDAR ESEVEIERVV AAAVGAIALG VSPLVYSAAG PDDAAVRQFD ATATQAGLAR GEAAQRVGEG LAEVMRRLLE RAPLQRIVVA GGDSSGEVAS ALDITALSVV AGLAPGAPLC KAWSERRERD GLEIVLKGGQ MGTASFFGAV RAGRLLD
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