Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0052 |
Symbol | |
ID | 4011771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 52521 |
End bp | 53906 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637939738 |
Product | hypothetical protein |
Protein accession | YP_546917 |
Protein GI | 91785965 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTCCA ACACCTCCTC CCTCATAGAC CTAGACCGCG CCCATCTGAT CCACCCTGTT GCGCCCTGGC GCAAACACGA ACAGCGCGGC GTCACCGTGC TGGAGTCCGG CCACGGCGCC TGGCTCAAAG ACGCCGCCGG CAATGAACTG CTGGACGCCT TTGCCGGCCT GTGGTGCGTC AACGTCGGCT ACGGCCAGGA GAGCGTGGTG CAAGCCGCCA CAGAGCAAAT GCGCAAGCTG CCCTATGCCA CGGGTTACTT CCACTTCGGC AGCGAACCGG CCATTCAGCT GGCCGCCAAA CTGGTCGAGA TTGCGCCGCC GTCGCTCAAG CATGTTTACC TGACGCTGGG CGGCTCCGAA GCCATCGATG CTGCCGTGCG CCTGATCGTG CATTACTACA ACGCCACCGG TCGCCCCGGC AAAAAGCAGT TCATCTCGCT GGAGCGCGGT TACCACGGCT CGTCGTCCAC CGGCGCAGGC CTGACCGCAC TGCCGGTCTT TCACCGCGGT TTTGACCTGC CGCGCCCGGA GCAGCATTAC ATTGCCTCGC CTTATCTGTA CCGCAGCCCG GAAGGCAGCA CCGCGCAGTC CGTCATAGAC GCCTCGGTGC AGTCGCTGCG CGCCAAAGTC GCCAGCCTGG GCGCAGACAA TGTTGCGGCA TTTTTCTGCG AGCCGATACA AGGCTCGGGC GGCGTGATCG TGCCGCCCAC GGGATGGCTC AAGGCCATGC GCCAGGCTTG CACCGAACTC GGCATACTGT TTGTGGTCGA TGAGGTCATC ACGGGTTTTG GCCGCACCGG CCCGATGTTT GCGTGCCAGG CCGAAGGCGT GGAACCCGAC CTGATGACCA TGGCCAAGGG CCTGACCTCG GGTTATGCGC CCATGGGCGC GCTGATGATG TCGGGCGCGG TGTATGCCGG CATTGCCGAC GGCGCAGCGC CAGGAGTGCC TATCGGCCAC GGCGCGACCT ATTCAGCCCA TCCCGTGAGC GCCGCGATTG CGCTTGAAGT CATACGCATC TATCAGGAAG GCGGCATGCT GGCCCACGCG CAAAAGGTGG CGCCACATTT TGCGCAAGGC CTTGATGCGC TGACAGCCCA CCCGCTGGTC GGCGAAGCGC GTCACCGCGG CTTGCTCGGC GCGCTGGAAC TGGTCAGCAA CAAAACCACC AAAGCCGGCT TTGACCCGGC GCTGGGCCTG TCCGACCTGC TGTTTGAAAC CGGCTACCGC AACGGCCTGG TGTTCCGTTC GTTTGGCGAC AACATCCTGG GTTTTGCGCC GGCGCTGTGC TACACCGAGG GCGAATTTTC GCAGCTCTTC GAGCGCCTTG AAAAGACCCT GGACGAGGTT CTGGCCGTGC CCGACGTGCG GCGCGCGCTG GGCTGA
|
Protein sequence | MPSNTSSLID LDRAHLIHPV APWRKHEQRG VTVLESGHGA WLKDAAGNEL LDAFAGLWCV NVGYGQESVV QAATEQMRKL PYATGYFHFG SEPAIQLAAK LVEIAPPSLK HVYLTLGGSE AIDAAVRLIV HYYNATGRPG KKQFISLERG YHGSSSTGAG LTALPVFHRG FDLPRPEQHY IASPYLYRSP EGSTAQSVID ASVQSLRAKV ASLGADNVAA FFCEPIQGSG GVIVPPTGWL KAMRQACTEL GILFVVDEVI TGFGRTGPMF ACQAEGVEPD LMTMAKGLTS GYAPMGALMM SGAVYAGIAD GAAPGVPIGH GATYSAHPVS AAIALEVIRI YQEGGMLAHA QKVAPHFAQG LDALTAHPLV GEARHRGLLG ALELVSNKTT KAGFDPALGL SDLLFETGYR NGLVFRSFGD NILGFAPALC YTEGEFSQLF ERLEKTLDEV LAVPDVRRAL G
|
| |