Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7023 |
Symbol | |
ID | 6277693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3401761 |
End bp | 3404052 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618046 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001890682 |
Protein GI | 187921650 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.180026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000131204 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACCAG ACCGGTTCGA ACCGCCGCCC GCGAGCCGCC TTGCCGCTAG CCGGCAGGAT GAGGCGTTGT TCCCCGCCGT GCCGGAACAG AACTTCCATG TGCGGCGCAT CACGCTGATC GCGCTGCTGA TCGCGGCGAT CGTGCTGCCG TGCGTGTATG TCGCGGCCAT GGCCATCAGC GATTTGCGCG CGCGCGATGC CGACGCCACC GACATGACGC TGCGCACCGT GCGGGTCGCC GAAGAGCACG CGCTTAAAGT GTTCGACATG AACGAGACGC TCGACGCGCG CATCGTCGAT CTGACCCAAG GATTGGACGA CGACGGCATT CGCGCCCGCG AAGCCGCTAT TCACGAGAAG CTGCGCGTGA TGGGCGGCGG CTATCCCCAA GTGGCCGCGG TGTCGATCTT CGGGCGCGAC GGCGCCTTGC TCGCCAGCAG CCGCTATCTG CCGGCGCCGG CCATCTCGGT CGGCGAGCGT GAAGATTTCA TCGGCATTCG CGACGGCAAG GATCTCGAGC ATGTGTCGAA GGTCATGACG GGGCATGTCG CCGGCGAACA GGTGTTCAAC ATGGGCGTCG AACGGCTTGG TGCCGACGGC TCGTTCGCCG GCGTGGTCTC TGTCGCGCTG CGGCCGAGCT ATTTCGACGC GTTCTACCGC GAACTGCTCG GCGGCAGCGG CAGCAGCAAC GGCACGCCGA TGACCATGAG CCTCGTGCGC GCAGACGGCT CGATCCTCGC GCATTATCCG CGCGCGCCGC GCGAGCCCAA TGCCATGGCC CCGCGAACTC CGTTCGCCGA AGCCCTCGCG CAAGGACGGC GGGCCGGCGT GGTGCGCATG CATTCGAACG TCGACGGCGA AGATCTGATC CTCGCGTTCC GCCACGTCGG TTCGTATCCT GTGTACGTGG TGTGCGGTTA CCGTGCCTCG GCGATCTGGG CCGCGTGGTA CCGGCACCTC GGCGTGCTGA TCCTGTCGAT GTTCACGCCG TCCATCGCCT TGTGGTGTGT GATCTGGTTG TCGCTGCGCC GCCTCGGCGC CGAACAGGAG GCGTGGGAGC GCTGGCAGGC CGAGGCGTCC ATGCGCCGTT CGATCGAATC GGCGTATCGC CAGTCGCGCA AGATGGAAGC GCTGGGCACG CTGGTCGGCA GCGTCGCGCA CGACTTCAAC AATCTGCTGA TGATCCTCTC GGCCAACGTG CAGATCGCGC GGCGGCGCGG CGTAACGGGT CTGGACCGCG AATTGTCGGC GATGGAGCGG GCGCTCAAGA GCGGCCAGTC GCTTACGCGG CAATTGCTCG GCGTGGCGCG CAAGCAGCCG CTGCGCAACG AGACGCTGTC GCTCGAACGC TGGCTGCCGG CGTGCCGCGA GTTGCTGCGC GCCTCGCTCG GCGCGAAGGT GTCGCTGGTG ATCGATATCG GCGTCGAGAT ATGGCCGATG CGCGTCGACG TCGCCGAGCT GGAGCTGGCG CTCATCAACG TTGCGGTAAA CGCGCGCGAT GCCATGCCCA ACGGCGGCCG CTTCACGGTG CGCGCCACCA ACATCCATTT CCGGCACGAA GAAGGCTTCC CGCTGACGGG CGACTTCGTG CAACTCTCGC TCGAAGATAC CGGCGCGGGC ATGGCGCCCG AGGTGCTCGC GCGAGCCTTC GAACCGCTGT TCACGACCAA GCCGAAGGGT ATGGGCACGG GCCTCGGCTT GCCGCAGGTT TTCGCGTTCT GCGAGCGCTC CGGCGGTCTC GCCGCGATCG ACAGCGCAGT CGGTGCGGGC ACCTCCGTGC GTCTCTATTT GCCGCGCGCC ACGGCTGAGC CTGAAGTCGA CGGGCCGCCG GACTCCGGCT CTGAGGAGAG CGGCGCGCCG TCAGGCTTGC GCATTCTGCT AGTCGAAGAC AACGAGGAAG TGGCCGCCGG CACCGAAGCC CTGCTGCAGA TGATGGGCCA TCAGGTCACG TGCGTCTTCA ACGCCGACAC GGCGCTGCGC CTGTTCGACG ACGCCCACGC GCGGCGAGCG CGCACCGGCG AACCGCTGCC GTTCGATCTG GTGCTGTCCG ACATCCACAT GCCCGGCACC CTGAACGGCA TCGATCTGGC CGAAGCGGTG CTTGCATTCG ACACCAAACT GCCGGTCATT CTGGTCACCG GCTACGCCGA GGAACTTGAC CGGGCGCGCC ATGTCGACGT GCGCGTGCTG TCCAAGCCTT TCGATATCGG TTTGTTGGAA GAACTTCTGC AAACGATCCA GCGCGATCTG ACGCAGACGG GCGCCGACCC GGCGGCGCAT ACGGCGGAGT AA
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Protein sequence | MTPDRFEPPP ASRLAASRQD EALFPAVPEQ NFHVRRITLI ALLIAAIVLP CVYVAAMAIS DLRARDADAT DMTLRTVRVA EEHALKVFDM NETLDARIVD LTQGLDDDGI RAREAAIHEK LRVMGGGYPQ VAAVSIFGRD GALLASSRYL PAPAISVGER EDFIGIRDGK DLEHVSKVMT GHVAGEQVFN MGVERLGADG SFAGVVSVAL RPSYFDAFYR ELLGGSGSSN GTPMTMSLVR ADGSILAHYP RAPREPNAMA PRTPFAEALA QGRRAGVVRM HSNVDGEDLI LAFRHVGSYP VYVVCGYRAS AIWAAWYRHL GVLILSMFTP SIALWCVIWL SLRRLGAEQE AWERWQAEAS MRRSIESAYR QSRKMEALGT LVGSVAHDFN NLLMILSANV QIARRRGVTG LDRELSAMER ALKSGQSLTR QLLGVARKQP LRNETLSLER WLPACRELLR ASLGAKVSLV IDIGVEIWPM RVDVAELELA LINVAVNARD AMPNGGRFTV RATNIHFRHE EGFPLTGDFV QLSLEDTGAG MAPEVLARAF EPLFTTKPKG MGTGLGLPQV FAFCERSGGL AAIDSAVGAG TSVRLYLPRA TAEPEVDGPP DSGSEESGAP SGLRILLVED NEEVAAGTEA LLQMMGHQVT CVFNADTALR LFDDAHARRA RTGEPLPFDL VLSDIHMPGT LNGIDLAEAV LAFDTKLPVI LVTGYAEELD RARHVDVRVL SKPFDIGLLE ELLQTIQRDL TQTGADPAAH TAE
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