| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7017 |
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| Symbol | |
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| ID | 6278612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 3396770 |
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| End bp | 3397378 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642618040 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001890676 |
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| Protein GI | 187921644 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00149668 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00221068 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGCAAG TAGGCGGGCC GGCGCTCGAC GATCCCGTTT ATCTGACGCA ACTGCGGCGC
GACCTGGTGC GCTTCGCCCG TTTGCAACTG CGCGATGCCG CCGCCGCGGA AGACGCCGTC
CAGGAAGCGC TCGCCGCGGC ATGGACGCAA GCCGATCGCT TCGCCGCGCA GTCGGAACAC
AAGACCTGGG TGTTCGGCAT CCTGCGGCAC AAACTCGTCG ACACCCTGCG CGCCCGGCGA
CGCACGATCA ACCTGTCGGC GCTCGAGTCC GAGCTCGACG GTGAAGGCCT GCTCGATCGC
GAGCTGTTCA AGGACAACGG CCATTGGTCG CGCGAAAGCA AGCCGCGCCC GTGGCCGACA
CCTGAAACCG TGCTGCGTCA GCAACAGTTC TGGACCTTGT TCGAGATGTG CCTGGAACGC
TTGCCCGAGC ACATCGGACG CGTGTTCATG ATGCGCGAAT TCCTCGATCT CGAGACCGAG
GCGATTTGCG CAGAATTGCA GATGACCGCG AATCATTGCA GCGTGCTGAT CTACCGCGCG
CGGCTGCGCT TGCGCACTTG CCTGAGCGAA AAGGGCCTAT CCAGCGAGGA CGCAAATGGG
GAAATGTAA
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| Protein sequence | MAQVGGPALD DPVYLTQLRR DLVRFARLQL RDAAAAEDAV QEALAAAWTQ ADRFAAQSEH
KTWVFGILRH KLVDTLRARR RTINLSALES ELDGEGLLDR ELFKDNGHWS RESKPRPWPT
PETVLRQQQF WTLFEMCLER LPEHIGRVFM MREFLDLETE AICAELQMTA NHCSVLIYRA
RLRLRTCLSE KGLSSEDANG EM
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