Gene Bphyt_6898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6898 
Symbol 
ID6279016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3265547 
End bp3266158 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID642617925 
Producthypothetical protein 
Protein accessionYP_001890561 
Protein GI187921529 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.800563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.546229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACT ACTTCTACGA CCCCGCCACC GGCCATGGCC TCCCGCACGA TCCGTTCAAA 
GCCATCGTCG CGCCGCGTCT GATCGGCTGG ATTTCCTCGC GTGACACCGC GGGCACATTG
AACCTCGCGC CGTACAGTTT CTTCGGCGCG TTCGCCAGCT TTCCGGCGAT CATCGGTTTC
TGCAGCGAAG GCCGTAAAGA CAGCGTCGCC AACATCGAAG CCACCGGCGA GTTCGTCTGG
AATCTGGCCA CCAAACCGCT CGCCGAGCAG ATGAACCGCT CGTCGGCGCC CGTTCCGCCG
CACGTCGACG AATTCGAACT CGCGGGGCTC ACTCCCGCGC CGGGCCGCAA CGTGGCCGTG
CCGCACGTCG CGGAATCGCC GGCTGCGCTC GAATGCAAGC TGCTGCAAGT GGTGCGGCTG
CATGCAATCG ACGGCACGCC GATGGACAAC TATCTGTCGC TCGGGCAAGT GGTCGGCGTG
CATATCAACG AGGCGTATCT GAAAGACGGC TTGTTCGACA CGCACGCGGC GCAGCCCATC
ATGCGCGCCG GCTACCGCGC CGACTACGCG GAAATCGGCG ACATGTTCCA GATGTTCCGC
CCGACCGCAT AG
 
Protein sequence
MSHYFYDPAT GHGLPHDPFK AIVAPRLIGW ISSRDTAGTL NLAPYSFFGA FASFPAIIGF 
CSEGRKDSVA NIEATGEFVW NLATKPLAEQ MNRSSAPVPP HVDEFELAGL TPAPGRNVAV
PHVAESPAAL ECKLLQVVRL HAIDGTPMDN YLSLGQVVGV HINEAYLKDG LFDTHAAQPI
MRAGYRADYA EIGDMFQMFR PTA