Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6898 |
Symbol | |
ID | 6279016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3265547 |
End bp | 3266158 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642617925 |
Product | hypothetical protein |
Protein accession | YP_001890561 |
Protein GI | 187921529 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.800563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.546229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCACT ACTTCTACGA CCCCGCCACC GGCCATGGCC TCCCGCACGA TCCGTTCAAA GCCATCGTCG CGCCGCGTCT GATCGGCTGG ATTTCCTCGC GTGACACCGC GGGCACATTG AACCTCGCGC CGTACAGTTT CTTCGGCGCG TTCGCCAGCT TTCCGGCGAT CATCGGTTTC TGCAGCGAAG GCCGTAAAGA CAGCGTCGCC AACATCGAAG CCACCGGCGA GTTCGTCTGG AATCTGGCCA CCAAACCGCT CGCCGAGCAG ATGAACCGCT CGTCGGCGCC CGTTCCGCCG CACGTCGACG AATTCGAACT CGCGGGGCTC ACTCCCGCGC CGGGCCGCAA CGTGGCCGTG CCGCACGTCG CGGAATCGCC GGCTGCGCTC GAATGCAAGC TGCTGCAAGT GGTGCGGCTG CATGCAATCG ACGGCACGCC GATGGACAAC TATCTGTCGC TCGGGCAAGT GGTCGGCGTG CATATCAACG AGGCGTATCT GAAAGACGGC TTGTTCGACA CGCACGCGGC GCAGCCCATC ATGCGCGCCG GCTACCGCGC CGACTACGCG GAAATCGGCG ACATGTTCCA GATGTTCCGC CCGACCGCAT AG
|
Protein sequence | MSHYFYDPAT GHGLPHDPFK AIVAPRLIGW ISSRDTAGTL NLAPYSFFGA FASFPAIIGF CSEGRKDSVA NIEATGEFVW NLATKPLAEQ MNRSSAPVPP HVDEFELAGL TPAPGRNVAV PHVAESPAAL ECKLLQVVRL HAIDGTPMDN YLSLGQVVGV HINEAYLKDG LFDTHAAQPI MRAGYRADYA EIGDMFQMFR PTA
|
| |