Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6746 |
Symbol | |
ID | 6280062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 3073346 |
End bp | 3074617 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642617774 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001890411 |
Protein GI | 187921379 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.909176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC CCTCGCAAGT TTCCGTGCCG TCCGGTCAGC CAATGCACGG CCTCGACTAT TCGGCGCGAC ATGAACGTTA CTGGCGCCGC AATCTGGCCG TGTGCGTATT CGGCTCGTTC ACGACGCTCG TCAGCCTGAG CATGCTGCTG CCGTTCTTGC CCATCTATGT CCAGCAACTC GGCGTGCAGT CGCAGTCCGC CGTCATCCAG TGGTCGGGAA TCGCGTTCGG CGCCACATTT CTCGGCACTG CCGTCACGGC GCCCGTGTGG GGGCGCCTTG CCGATCGTTA TGGCCGCAAG CCGATGCTGG TGCGCGCGGC CGTCGGCATG GCCGTGGTGA TGTCGTTGAT CGGTGTTGCG CACAACGTGC ATCAACTCGT CGCCCTGCGT TTGCTCGCGG GTCTGGTGGG CGGCTACTCG TCGGCGTCGA CGGTGATGGT CGGCACCCAG GCGCCGAAGG AACGCGCGGG CTGGGCGCTC GGCGTCCTGT CCACGGGCGC GCTGGCCGGC AACCTGATCG GGCCGCTCGT CGGCGGTTTT TTGCCGGGCT GGCTCGGCAT TCGCGGCACG TTCTTCGCCG GCGGCGCCAT GATCGCGGTC GCCGCCCTGC TCACGATTTT TGTCGTCAAG GAAGATTTCG ATCCTGCCAC TCATTCGAGC CGCCGTCCCC CAGAACACGC CACGGCGAGT ACGCATCGCA ACAACTACCC GGTGATCGCC GCGTTGCTCG TCACGGCGAT GATGGTGCTG CTTGCCAACA TGTCGATCGA GCCGGTCATC ACCGTCTATG TGGGCAGTCT CGGCGTGCAG TCGCTGCATC TGGCGCGCGT GGCGGGTATC GTGATGGCCT GTTCGGCTTT CGGCAGCATG CTGACGGCCG CGCGCCTCGG CGCATTGGCC GATCGGGTCG GCAGTTGGAA CGTGATCGTC GCTTGCCTGG TGCTCACGGG TCTGGTGATG ATTCCGCAAG CGTTCGTTCA CGCGTGGTGG CAACTCGCGG GTTTACGCGC GCTGATGGGC ATGACGCTGG CGGGTCTCCT GCCTGCGATT GCGAAACTCG CCCGGCATGC AGTGGAAGAG CACAAGACCG GTCAGATGCT CGGCTATCTG CAGTCGGCGC AATTCAGCGG ACAGGTCGTC GGTCCGATTA TCGGCGGCGT GATCGCTGTC CATCTCGGGC TGCACTCCGT GTTCTTCGTC ACCGGCTCGT TGCTGGTGGC GTGTGCCGCG CTTGCGCAGT GGGCCCGGAC TCGTCAGAGT CTCGCTGTTT GA
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Protein sequence | MNTPSQVSVP SGQPMHGLDY SARHERYWRR NLAVCVFGSF TTLVSLSMLL PFLPIYVQQL GVQSQSAVIQ WSGIAFGATF LGTAVTAPVW GRLADRYGRK PMLVRAAVGM AVVMSLIGVA HNVHQLVALR LLAGLVGGYS SASTVMVGTQ APKERAGWAL GVLSTGALAG NLIGPLVGGF LPGWLGIRGT FFAGGAMIAV AALLTIFVVK EDFDPATHSS RRPPEHATAS THRNNYPVIA ALLVTAMMVL LANMSIEPVI TVYVGSLGVQ SLHLARVAGI VMACSAFGSM LTAARLGALA DRVGSWNVIV ACLVLTGLVM IPQAFVHAWW QLAGLRALMG MTLAGLLPAI AKLARHAVEE HKTGQMLGYL QSAQFSGQVV GPIIGGVIAV HLGLHSVFFV TGSLLVACAA LAQWARTRQS LAV
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