Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6700 |
Symbol | |
ID | 6279503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 3016052 |
End bp | 3016570 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642617729 |
Product | uncharacterized peroxidase-related enzyme |
Protein accession | YP_001890366 |
Protein GI | 187921334 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain [TIGR01926] uncharacterized peroxidase-related enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGTA TCACTGCCCT GACCTCCGAG CAAGCCTCTC CAGTTGCACT CAAATTGCTG CAAAATGCAA AAGCCAAGAT CGGCATGGTG CCGAATCTTT TCAGTACACT TGCGCATGCT CCCGCTGCAC TCGCAGGCTA TCTGCAACTT GACGAGAACC TGAAGACTGG CGCGTTGAGC GCAGCTCAGC GTGAAATCAT CTCTCTGGCT ATCGGGCAGT TCAACCAATG TGGCTACTGC CTTTCGGCTC ATACTCTGAT GGGGAAGGGC GCAGGCTTGT CTCCGGATGC CATCGCAGCC GCGCGCCTTG GTAGTGGTAG CGCTGTTGCC GAGCTGGCAG TGCAAGTAGC GCAAACGCGC GGCAATGTAA GCGATGCGGA TCTGAGCGCC GCCCGTGCCG CTGGCTTGAG CGATGAGCAG ATAATCGAAG TCGTCGCCAG CGTCGCGCTC AACGTGCTGA CTAACTACGT CAATAACCTT GCAGAGACCG TGATTGATTT TCCGAAAGTC TCCGTCTGA
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Protein sequence | MPRITALTSE QASPVALKLL QNAKAKIGMV PNLFSTLAHA PAALAGYLQL DENLKTGALS AAQREIISLA IGQFNQCGYC LSAHTLMGKG AGLSPDAIAA ARLGSGSAVA ELAVQVAQTR GNVSDADLSA ARAAGLSDEQ IIEVVASVAL NVLTNYVNNL AETVIDFPKV SV
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