Gene Bphyt_6652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6652 
Symbol 
ID6278083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2966187 
End bp2967023 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content59% 
IMG OID642617684 
Productalpha/beta hydrolase fold 
Protein accessionYP_001890321 
Protein GI187921289 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.451286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA TCAGTCACGA TACAGCACCG ACCCAATTCG TCGAGGCCAA CGGCATCCGC 
TTCGCCTACC GCCGGTTCGG CAAACAGGGT GGTTTGCCGC TTGTCTTCAA TCAGCATTAC
ACCGGCACCC TGGACCACTG GGATCCGGCA GTGACCGATG GTTTTGCAAA GGATCGCGAA
GTGATCCTGT TCAACAATGC CGGCGTCTCC AGTTCTTCAG GCGAAACTCC GACGAGTTTC
CAGGAGATGG GTGCCAATGC GATCGCCTTC ATTCGCGCGC TGGGTCTGAC GCAGGTCGAC
GTGCTTGGCA TTTCGATTGG GGGCTTCGTG GCGCAGGAGA TTGCGCTGCA GGGCGGTAAC
CTTGTCCGCA AGGTCATCCT CGTCGGCACC GGGCATCGTT CGCAGGACAT GTCGGAAAGC
CGCTCTGCGG AAATCTTCGC CGGCAGCTAT GACCCGCCCG AACATCTGTG GCTTTCTGTT
CATTTCGGAC CGTCCGAAGC CAGCCAGAAG GCCGGCCTTG CCTTTCTCGA GCGCAAGCTG
CGCCGTCAGG ATCGCGATCC GCAAGTAAGC GCACAAACCC TTGCCGCCCA GGGCGAGGCG
ATCGGCAAAT GGCATGTGCC GAACGATAGC GCGTTGGAGT ATCTGAAAGG GATCCGGCAG
CCCGTGTTGA TCGTCCAAGG CAGCAACGAC GTCATTATTC CGACAAGGCA TTCGTTCACG
CTCCAGCAGC ATCTGCCGAA CGCGCAGCTG ATCGTCTATC CGGACTCCAA TCACGGCTCG
ATTTATCAGT ATCCGGAGTT GTTCGTCGCC AATGCGACGA CCTTCCTCGA CGCCTGA
 
Protein sequence
MNSISHDTAP TQFVEANGIR FAYRRFGKQG GLPLVFNQHY TGTLDHWDPA VTDGFAKDRE 
VILFNNAGVS SSSGETPTSF QEMGANAIAF IRALGLTQVD VLGISIGGFV AQEIALQGGN
LVRKVILVGT GHRSQDMSES RSAEIFAGSY DPPEHLWLSV HFGPSEASQK AGLAFLERKL
RRQDRDPQVS AQTLAAQGEA IGKWHVPNDS ALEYLKGIRQ PVLIVQGSND VIIPTRHSFT
LQQHLPNAQL IVYPDSNHGS IYQYPELFVA NATTFLDA