| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6591 |
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| Symbol | |
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| ID | 6278282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2889876 |
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| End bp | 2894666 |
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| Gene Length | 4791 bp |
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| Protein Length | 1596 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642617624 |
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| Product | alpha-2-macroglobulin domain protein |
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| Protein accession | YP_001890261 |
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| Protein GI | 187921229 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.509097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0153598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAA TGATTTCCGT CACACGATCA AGCGGTTGGT TGGGCAAGGC GCGCCGTCGC
GCGGCATGCA CGTTCGCGGC GCTAGTCGCA GCGTTGACAC TGGTCGCCGC ACCCGCCGCT
TATGCGGACG ACGAAGCGTC GAGCGCGGCC GCCGCCGATG CCAACATCGC CGGCAATCCG
ACGCTGCAGA CGGCGCCGTC GAGCAACTTC AGCTCGCAGA AAGTGGACGG TCAGCCGTTC
TTCCTGCTTT CGGATGCGAG CTTCGGCAGC GATCAACCGG CACAAGTGCG GCTCGAAGCG
CCGGGCCGCG ATTTCAAGGA TGCATTGCAA GCGTACGGCG GCGCGGACAT CGTCGTGTAT
CGCGTGCCGA AGCCGCTGGA CTTTCTCAAG GCGCAAAAGA ATCTGCATCG GCTGAATGTC
GCGCCGAATT ATCAGGGCGA AGGGCTCGCG AATACGCTCG CGTATCTGTG GGACCGCTGG
TTTACCGAAG CACGTCGCGC ATGGCAGCGG GTGCTGTCGT TCGCAACCCG CAGCAAGGCG
ACCGAAGCGG CGCCGCAATT CAAGCTCGGC GAACAGACCG GCAAGCAAAC GCAGTTCGAG
TCGAACTCGC AATTCGCGCC GCTCAAAGGC TACGACATGG TCGCGCGTTT TCGCTATCCG
ATCTGGGACG CGAAAGTGAT CGAGCCGCCG AAGGGCGTGA ATCTCGCGGG CAGCAGCAGT
AACTTTATCG AAGCCAGTTC GGGCAACGTG ATGATTCCGG TCGGCAAACT GCCGCCGGGG
CTGTATATCG TCGAGGCGGT GATCGGCAAC TATCGCGCGC ATACGCTGCT GTTCGTGTCG
GACACGGTGG CGGTCGTGAA GGCGGCGTCG AGCGGCATGT TGGTGTGGAC CACGCGGCGC
GATAACGGCA AGCCCGTGGC GAATACGGAA GTGAACTGGA CCGACGGCGT GGGCGTTCTG
CAAAGCGGCA CGACCGGCGG CGACGGCGCG CTGGTGCTGC AACACGTGAG CCCCGAGCGC
AGCTATGTGC TCGGCGCCGA TCCGCAGGGC GGCGTGTTCG TCTCCGAGAA CTTCTACTAC
GACAGCGAGA TCTACAACAC GAAGATCTAC GCAGTGACCG ATCGGCCGAT GTACCGGCCG
GGCGATCCGG TGCATGTGAA GTTCATCGGC CGCACGTTCC AGAATGCGAC GCAATCGTCG
GCGCCGGCCG AGGCCGATAT CAAGCTCGAC GTGCTCGATC CGAACGGCGC GCCGGTGGCG
ACCAGCAAAG TGCATTTCGC CTCCGATACC GGCGCGGATA CCGCGTTCAC GCTGCCCGCC
GACGCCACCG CCGGCGGCTA CACGCTGCGC TTCGACTACA TCGGCGATGT CTACGGCAGC
GCGTTTCGCG TCGCCGAATA TGTGAAGCCG CACTTCGACG TGAACTTGTC GATGGATAAA
GCCGACTACG CAACCGGCGA GGCGCTGAAG GGCAAGATTC AGTTGCGCTA TCCGGACGGC
AAGCCGGTGC GCGACAGCAA GATTTCGGTC ACGCTGCGCG CGCAGAAAGT GACGATCGTC
GACGGTGAAT TGCGTTATGC GGGACTGTTC CCGGTCAAGC TCGACCAGCA GGAACTGAAG
ACAGATAGCG ACGGCAACGC GACCCTGACG CTGCCGGCCG CGAAGGAGCC GAGCCGCTAC
GCGTTGACGC TGTTCGCACA GGACGGCGCG GCGTACAAGG TGCGCGTGAC GCGCGAAGTG
CTGATCGCGC GCGGCGCCAC GCCGTATCGT TTGACCACGG CCAAATCGTT CTCGCAACCG
AAGCAAGCAG TCAGCTTCGA TTTGCAGGCG CTAGGCGCGA TCGATCCTTC GTCACATGCG
CCGTCGAAAT ACGAGTGGAC GCGTCTCGAA TCGCAAACGC ATGGCGAAGG CGCGCTAAAG
GGCGCGAGCG CGGGCGATAA GTTGTCGTTC CCGGTGCAGT TCGACGAGCC GGGTTCGTAC
ATGATGTCGG TGAAGGACGA CTTGGGCAAC CTGCTCGCCG CCACCAGCCA CTGGGTCGCG
GGCGACGGCC TGAAGGCGAT TCCGGGCAGC GTCGAGATCG TGTTCGATCG CGACAAGTAC
AAGATCGGCG ACACCGCAGA AGCATTGATC ACATTCCCGA TGCCGGTCGA CGACGCGCTG
CTCACGCTCG AACGCGACAG CGTCGAGCGT CGCGCGTTGC TGACGGCGGG CGGCGACTGG
CTGCAATTGC AACGCGTGGC GCCTTCCCAA TGGAAAGCGC GCATCAAGGT CGGCGCTGAC
TTCGCGCCGA ACATGACGTT CTCTGTGTTG TACGTGCACG CGGGCGAATA TGTGTTCCAG
AACGCGGGCA TCGTGGTCGC GCAACCGCAG ATCGAATTGA ACGTGAAAAG CGATAAGCCG
GTGTACGGAC CGGGCGACAC GGTCACGCTG AATTTCGACA GCACGTTGAA CGGCAAGCCG
GAAGCGGCGA ACCTGACTGT GAGCGTGGTC GACGAAATGG TCTACGTGTT GCAGCCGGAA
ATCGCGCCGA ATATCGTCGA CTTTTTCTAT CATCCGCGCC GCAATAACGT GCGGACTTCG
TCGAGCCTGT CGTTCATTAC CTACGACCTC GCGCGCTCGC CGTTGAAGGG CGCGCCGGGC
GGACCGCAAC GCGCCAACTA CAACGAGCGC GGCGTGAAGG TGCTCGAACG GCCGCGCCGC
GACGATCAGG ACACGGCAGC GTGGGAAGGC AATCTGAAAA CCGACGCGAG CGGCCACGCC
ACCATGACGT TCAAGATGCC CGATTCGCTG GCGCGCTGGC GCATTACAGT GCGCGCGGCG
GCGCCGGATG GCATGGTCGG TCAACGCACT GCTTATGTGC GCTCGGACAA GGCGTTGTAT
CTGAAGTGGA GCGGGCCGTC GCACTTCCGC GTCAACGATC AGCCGGCCAT CGATATGATC
GCGTTCAATC AGACCGACGC GGATATGGAC GCGCAGTGGG TGGTGGACGG CGGCGGGTTG
TCGCTCAATC AGAAGGTCAC GCTCAAGCGC GGCGCGAACT ATCTGCGGCT GCCGGGCGGC
GCGCTGAAGG ACGGCGTGAT CAACGCGTCG CTGCGCAGCG CGGGTAAGGA CGTCGATCGT
CTGCAAACCA CGATTCATCT CGACGCGAGC GGCTGGCTCG ATCTGCATCA GAACACGGTG
TCGCTCGACG GCTCGAACAA GCCGCTCAAT CTGCCGCTAG ACGCACAGGA TGTGAGCGTG
CGTTTCATCG GCAACGCGCA GAGCCAGTTC ATGCGCGTCG CCGACGATCT GATCAACTAT
CCGTACGGTT GCGCCGAGCA GACTTCGAGC CGGTTGATTC CGCTGGCGCT TGCGCACGAC
GCGATCGGCC ACGGCGACAA TGCGAGTTCG ACGCAAGGGC TCGAAGCGCT GCTGCGCAAT
CAGCGGCAGC GTCTGGCTAT GCTCGCGGGC GTCGGCGGTA CGTTCGGCTG GTGGGGCGAT
ACCACCGGCG GCAGCGCGCT GATTACGGCG TACGCGTATT ACGCGGATTG GCTCGCGAGC
CGCAGCCTCG GCATCAGCCT GCCCGCCGAC AACTGGCAGC ACGCCATGGA CGTGTATCGC
GACGCCGGGG CCAAAGAGCC GCTGTTGCAT CGCGCGCTGG CTTTGTGGCT CATGCAGCAA
ATGGGCCTGC CGGTCGCGAC GCCGGTCGCG GGCGTGGCCG CGGATCTGAT GAGCGATGCC
GCAGCCACCG CCGCTAAAGC GCCCGCGCGC AGCGGCACGT ACGGTGCGTC GGACAGCATC
GTGTTCGCGC AGGCGGATTC TCCGCGTGGC AAGCAGATGG CGACGCTGCT GATCTCGAGC
ATGGCGCGCA GCACGAGCGC GCAAATTCCC GACGGATTCG ACGCCGCGGC GAGCGCGGCG
CGCCTCACGC TGGTGAACGA TCCCGCGCCG CTGGTGCAAA GCCTCATCGC GATGACGGGC
GACGGCGGAG CGAGCGCCGA CGCCCCGGCA TTACTGGCAA AAAGCAGCGC CGACTATCCG
ACGCTCGATC GCGCCTTGAC GCTGCTGTGG CTGCGCAAGT CGCTCGGCGC GGATCCGGCT
GCTGCGTCGC TGCCGTCGCT CCAGGGCACG GGCTGGACTC GCGCCACGAC GTTGACGGGC
ACGCCGCTCT ACAAGTGGAC CGGCGCGGCG CAGCCGACCA CGCTTGATGC CGGCGCCGCG
CGTACCGACG TCAACGCGCT GGTTTCGTTC CGCAGCCACA CGAGCGAAGA CAGCCGCTTG
AACATCACCG TCGAGCGGCG TTTCTACAAG CTCGAACCGG TCGAAGTCGC GGTCGACATG
AAGAAGGAAG CCGCTGGTGA GAGCCAGTTG GGCCGCTCGG CCTTCACCGC GCGTCTGATG
AAGCAGGGCG ACGCGATCGA CAGCAATGCG CTCTACGTCG ACGAAGTCAC GCTTACGCCG
CGCTCCGGCA ACGCGTACCA CTATGGTCTG CTCGACGTGC CGCTGCCGCC GGGCGGCGAT
GTCGAGGCAA CGAGCTGGGG CGTGTCGATC GACGGTCTGC CGGGCGCGAA AGACGGCGCC
AGCGGTCCGC AGCCGTTCCA GCGCGTGGCG TCGTACGAGA TGGGTGAGCT GGCTTATCAC
CAGCCGGTGC CCTTGCTCGA CCGGCCGGTC ACGCTGCGGC AACTGGTGCG CTTCGCATTG
CCCGGCACGT TCGCGTTGCC GCCCGCGCGC TACTTCCGCA TGTATCAGCC GGACGCGAAG
GCGTTCGAAG GCGGCAAGAG CGATCGCGTG ACGACGCTGC GCATCCAGTA A
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| Protein sequence | MTRMISVTRS SGWLGKARRR AACTFAALVA ALTLVAAPAA YADDEASSAA AADANIAGNP
TLQTAPSSNF SSQKVDGQPF FLLSDASFGS DQPAQVRLEA PGRDFKDALQ AYGGADIVVY
RVPKPLDFLK AQKNLHRLNV APNYQGEGLA NTLAYLWDRW FTEARRAWQR VLSFATRSKA
TEAAPQFKLG EQTGKQTQFE SNSQFAPLKG YDMVARFRYP IWDAKVIEPP KGVNLAGSSS
NFIEASSGNV MIPVGKLPPG LYIVEAVIGN YRAHTLLFVS DTVAVVKAAS SGMLVWTTRR
DNGKPVANTE VNWTDGVGVL QSGTTGGDGA LVLQHVSPER SYVLGADPQG GVFVSENFYY
DSEIYNTKIY AVTDRPMYRP GDPVHVKFIG RTFQNATQSS APAEADIKLD VLDPNGAPVA
TSKVHFASDT GADTAFTLPA DATAGGYTLR FDYIGDVYGS AFRVAEYVKP HFDVNLSMDK
ADYATGEALK GKIQLRYPDG KPVRDSKISV TLRAQKVTIV DGELRYAGLF PVKLDQQELK
TDSDGNATLT LPAAKEPSRY ALTLFAQDGA AYKVRVTREV LIARGATPYR LTTAKSFSQP
KQAVSFDLQA LGAIDPSSHA PSKYEWTRLE SQTHGEGALK GASAGDKLSF PVQFDEPGSY
MMSVKDDLGN LLAATSHWVA GDGLKAIPGS VEIVFDRDKY KIGDTAEALI TFPMPVDDAL
LTLERDSVER RALLTAGGDW LQLQRVAPSQ WKARIKVGAD FAPNMTFSVL YVHAGEYVFQ
NAGIVVAQPQ IELNVKSDKP VYGPGDTVTL NFDSTLNGKP EAANLTVSVV DEMVYVLQPE
IAPNIVDFFY HPRRNNVRTS SSLSFITYDL ARSPLKGAPG GPQRANYNER GVKVLERPRR
DDQDTAAWEG NLKTDASGHA TMTFKMPDSL ARWRITVRAA APDGMVGQRT AYVRSDKALY
LKWSGPSHFR VNDQPAIDMI AFNQTDADMD AQWVVDGGGL SLNQKVTLKR GANYLRLPGG
ALKDGVINAS LRSAGKDVDR LQTTIHLDAS GWLDLHQNTV SLDGSNKPLN LPLDAQDVSV
RFIGNAQSQF MRVADDLINY PYGCAEQTSS RLIPLALAHD AIGHGDNASS TQGLEALLRN
QRQRLAMLAG VGGTFGWWGD TTGGSALITA YAYYADWLAS RSLGISLPAD NWQHAMDVYR
DAGAKEPLLH RALALWLMQQ MGLPVATPVA GVAADLMSDA AATAAKAPAR SGTYGASDSI
VFAQADSPRG KQMATLLISS MARSTSAQIP DGFDAAASAA RLTLVNDPAP LVQSLIAMTG
DGGASADAPA LLAKSSADYP TLDRALTLLW LRKSLGADPA AASLPSLQGT GWTRATTLTG
TPLYKWTGAA QPTTLDAGAA RTDVNALVSF RSHTSEDSRL NITVERRFYK LEPVEVAVDM
KKEAAGESQL GRSAFTARLM KQGDAIDSNA LYVDEVTLTP RSGNAYHYGL LDVPLPPGGD
VEATSWGVSI DGLPGAKDGA SGPQPFQRVA SYEMGELAYH QPVPLLDRPV TLRQLVRFAL
PGTFALPPAR YFRMYQPDAK AFEGGKSDRV TTLRIQ
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