Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6537 |
Symbol | |
ID | 6278356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2827411 |
End bp | 2827881 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642617568 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_001890211 |
Protein GI | 187921179 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.201415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGG ACCAATTTGA CCGAAAAATT CTCTCGCTTT TACAGGCGGA TGCGTCGATG CCAATGAGTG CGGTCGGAGA TGAGGTTGGG CTATCCCAGT CGCAGGTCTG GCGGCGAGTG GAGAAGTTGG AAAGCGGGGG TGTTATCGTT CGGCGGGTGG CAATTCTTGA CCGCATGAAG CTCGGGCTTA CTGTTCAGAT GTTCACGCAG GTAAAACTGA ACAAACACAG CGAGCGGGCC GGCGAGAAGT TCAAAGCGGC CGTTGAGCAA TATCCGGAAG TGGTGGAAAT CCACACAATC CTAGGCAACG TTGATTTTCT CCTTCGCATC GTTACGGTAG ACCTCAATGC CTATAGCAAG TTGCTCGCGG ACAGGCTCTC AAGCCTGCCG ATGGTTCAGG AGGTTCACAC GCTCATTAGT CTTTCATCGG AACCTGGCCG CCGCGGACTG CCGGTGTTCT TGCCGGGATA A
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Protein sequence | MNLDQFDRKI LSLLQADASM PMSAVGDEVG LSQSQVWRRV EKLESGGVIV RRVAILDRMK LGLTVQMFTQ VKLNKHSERA GEKFKAAVEQ YPEVVEIHTI LGNVDFLLRI VTVDLNAYSK LLADRLSSLP MVQEVHTLIS LSSEPGRRGL PVFLPG
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