Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6456 |
Symbol | |
ID | 6279134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2727645 |
End bp | 2728400 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642617491 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001890134 |
Protein GI | 187921102 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000225653 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000000041248 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCGGT TGGCCAATAA GATTGCATTC ATCGCTGGAG GTGCTGGAGG CATCGGAGCG GCCGCCGCGC ACCTGTTTGC GCGTGAGGGT TGTCAGGTTG CGATCGGCGA TCGCGACTTC GACGAGGCAC GCCGCACCGT CGAGGCAATC AAGCAAGAGG GCGGACGCGC CGCTGCTTTT CCCCTTGATG TAACGCAGGA GGACAGTGTA CGGGCTGCCA TCGGCGACGC AGTCGAGGCG TTCGGCGGAC TGGACGTGCT TTACAACAAT GTTGGGGGCT CGTCCACCAA AGATGCCTCG GTCACCGAAG CGCCACTTGA AGAGTTCTGG CGCTGTATCA ACGTCGACCT GTTTGGCACG TGGCTGGGCT GCCGCCACGG TATTCCCGAG CTGATCAAAC GCGGAGGAGG TTCGGTGATC AACACGTCGT CGATCCTTGC CTTGATGGGG TCGCCAAATA AGGACGCCTA TACCGCAGCG AAAGGTGCGG TGAGTGCGTT GACGCGCTCG ATGGCCGTCG AATACGCGTC GCACAAGATC CGTGTGAACG CGATTGCGCC AGGCATTACG CGTACGCCAC GCGTCGAGCG CTTGCTCGCT GAAGATGGGG TGACTGCGCG GCTCTCGGAG AATTACCTGC TTGGCATTCT CGAACCGATT GATATCGCGC AGATGGCACT TTATCTCGCA TCAGACGAGT CGCGGTTGAC GACTGGACAG ATCCTCTCGG TAGACAGCGG CGCATCGATC GTCTGA
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Protein sequence | MNRLANKIAF IAGGAGGIGA AAAHLFAREG CQVAIGDRDF DEARRTVEAI KQEGGRAAAF PLDVTQEDSV RAAIGDAVEA FGGLDVLYNN VGGSSTKDAS VTEAPLEEFW RCINVDLFGT WLGCRHGIPE LIKRGGGSVI NTSSILALMG SPNKDAYTAA KGAVSALTRS MAVEYASHKI RVNAIAPGIT RTPRVERLLA EDGVTARLSE NYLLGILEPI DIAQMALYLA SDESRLTTGQ ILSVDSGASI V
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