| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6450 |
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| Symbol | |
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| ID | 6278372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 2721032 |
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| End bp | 2722984 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642617485 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001890128 |
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| Protein GI | 187921096 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.137108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000000000110833 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTTCAC AACCCGATCC TGTGTGGTGG CCGACCGCCA CCGATGTATC GAACGCTCAG
GTGACTTCGC TGATCAGGGC GCTCGGGCTA CGCGATTATG ACGAGCTTTA CGCGTACTCC
ATTGCAAATC CCGGCGAGTA TTGGCACCGG CTGATGGTAT GGCTCGGCAT CCGCTGGCAG
GCTCCATATT CGGCGTACGT TGATCTATCT GACGGAAAGC CATTTCCACA ATGGTTCCCG
GGCGGCAAGC TAAATTGGGT CGACAGCATT TTCGAGTGTG AAGCGGATAA GGAGCGTTTG
CAGCGTATCG CGTTGATTGC GGAAGACGAA AGCGGCCGCG TGACGCAGCG TACCTATGCC
GAGTTGCGAG AAGACGTTCA GTCCTTCGCG GCGGGCTTGA TGACATCGAA GTTGGGCCCG
GGAGATTGCG TTGGGCTGTT GATGGAAAGC AGTGTCGAAT CGGTCGTGAC CTATCTTGCT
CTTTCTTATA TTGGCGCGAT CGCTGTGCCA CTGTTTTCTG GCTTTGGCGC AGATGCGATC
GTGGCGCGCC TGCAAGGGTG CGATGCGAAG GGGCTTGTCG CGACGGCAGG ATTCATGCGG
CGTGGCAAAC CGGTTTTGAC GCGCGACGCG ATCGAATCGA GCATTCCAGC GTTGCCTTCG
CTGGAAGTTC TGGTGGTAAA ACCAATGCGC GGATCTCAAG GGAGCGTGCA TGCGGGCGCG
CTGGACTGGT ATGACGTCCT CGCCGCAGGT CGCGCTGAAC CGCTTGATCA CGCTGTTCCG
GCCGAGGCCA ACACGCCATG CATGATCGTC TACACGTCTG GCACGACTGG CAAGCCTAAA
GGCACTGTGC ATACGCATGG CGGCTTTCCG CTGAAGATTG CGCATGACGC AGCGGTGTAC
TTTAACCTCG GTGCGGGTGA CAGGTGGCTA TGGCCGGCCG ATATGGGCTG GGTTGCCGGG
CCCATCACGA TCGCGGGCGC CTTTCTGCGT GGCGCGACCC TCGTCTGTTA CGACGGTGCG
CCAAACTGTC CCGACTGGTC TCGTCTGCCG CAACTGATCC GTCGTTACGC TGTAACTCAC
TTCGGGGCAT CGCCAACGCT GATTCGAACG CTCTCTGCAC ATGAGTCTTC GATCGCACCG
GACGATCTCT CGTCTGTACG TCTCGCCATC ACCGCGGGCG AGGTGATCGA TTCAGAGAGT
TTTCGCTGGT ACGGCGAGCG TTTTGCCTGC CCGGTAATCA ATTTCACTGG CGGTTCGGAA
GTGTCGGGCG GCCTGCTTGG GAACGTCGTT GTCAAGCCGA TCGTGCCGGG AGGCTTTAAT
GCAATTGCAC CGGGCATCCG TGTCGATGTT CGAGGCGCTG ACGGCAAGCA GGTACGGGGT
GAAGTTGGCG AGCTTGCTGT ACTCGAGCCG TTCGTCGGTA TGACACGTTC GTTCTGGAAA
AACCCTGAGC GGTATCTTGA TACGTATTGG CGCAATGTGC CTGATGTCTG GATCCACGGC
GATCTCGCAA TCCAGTTTGA CGATCACGCG TTTGTACTAT GCGGCCGGTC GGACGACACG
CTAAAGATTG CCGGCAAGCG AGTCGGGCCG TCGGAAATCG AAGACGTCAT CGTTGAGATT
GCTGAAGTCG CCGAAGCGGC TGCGGTTGGC ATAAGTGATC CGGTCAAAGG TCAGCGACTG
GTTGTCTTCG TGGTGGCTGA CAAGGAGCGC TGTACGGTGG CATTCCGTGA GCAGATCGTA
GACATGGTGT CGCGCAGACT CGGCAAGCCA TTTGCACCGT CGCAAGTGTA TGTAGTCGGC
GAACTGCCGA AGACGCGCAG CGGCAAGATT ATGCGACGTC TGATCAAGCG GGCATACGAA
GGGCAGCCGC TTGGCGACAC GGCCTCACTT GAGAACCCTT GGGCAATCGA GATGATTCGC
GAAGTAATGA AATTGCCTAT AGAACCCGCA TGA
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| Protein sequence | MPSQPDPVWW PTATDVSNAQ VTSLIRALGL RDYDELYAYS IANPGEYWHR LMVWLGIRWQ
APYSAYVDLS DGKPFPQWFP GGKLNWVDSI FECEADKERL QRIALIAEDE SGRVTQRTYA
ELREDVQSFA AGLMTSKLGP GDCVGLLMES SVESVVTYLA LSYIGAIAVP LFSGFGADAI
VARLQGCDAK GLVATAGFMR RGKPVLTRDA IESSIPALPS LEVLVVKPMR GSQGSVHAGA
LDWYDVLAAG RAEPLDHAVP AEANTPCMIV YTSGTTGKPK GTVHTHGGFP LKIAHDAAVY
FNLGAGDRWL WPADMGWVAG PITIAGAFLR GATLVCYDGA PNCPDWSRLP QLIRRYAVTH
FGASPTLIRT LSAHESSIAP DDLSSVRLAI TAGEVIDSES FRWYGERFAC PVINFTGGSE
VSGGLLGNVV VKPIVPGGFN AIAPGIRVDV RGADGKQVRG EVGELAVLEP FVGMTRSFWK
NPERYLDTYW RNVPDVWIHG DLAIQFDDHA FVLCGRSDDT LKIAGKRVGP SEIEDVIVEI
AEVAEAAAVG ISDPVKGQRL VVFVVADKER CTVAFREQIV DMVSRRLGKP FAPSQVYVVG
ELPKTRSGKI MRRLIKRAYE GQPLGDTASL ENPWAIEMIR EVMKLPIEPA
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