Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6426 |
Symbol | |
ID | 6278321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2695517 |
End bp | 2696431 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642617467 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001890110 |
Protein GI | 187921078 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.742586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCGT CCACCGAGAA TCTCTCCAGT GGTATCAGCG TATTTGCTGC AGTGGTCGAT GCCGGGACAT TCGCAGCCGC TGCGGCGTTG ATGGACATGT CGCCGCCCGG TGTGAGCCGG GCCATCGCCA GGCTCGAAAA ACGCCTGAAA ATACGGCTTT TCAATCGAAC CACCCGCGCT GTTTCCCTGA CTGAAGAGGG CCGGCAGTTC TACGAGCAGG TCATGCCGCA CCTGAGGGGC ATGGAGGAAG CAGCGGCGGC CGCGGCGGGA GGCGGCGCGA TAGTCCGCGG CAAGCTGCGC ATCAATCTCG ATCCGGTTTT TTCGCACATC CTTCTCGGCG CAAAACTCGA CGCGTTCATG GACGCGCATC CAGAGATCGA ACTCGAATTC ATTGCGAGAG ATCAGCTTGG CGATTTGATC GTGGACGGCT TCGATCTGGC ATTGCGATTC GGCGAGCCGC GCTCATCGAG TCTGATTGCG CGAAAGCTGC TTGACGCTAC GATTGTCACC GTCGCGTCGC CCTTGTACAT CGCGAGCCGG GGGCGGCCCA CTGAACCACA GGAGCTGGGC CGAGGCATAC ACAGATGTCT CGAGTTCCGC AACCCAGAGA CAGGCAAGCC CTATCACTGG GAGTTTCATC GCAAGCGCAA AAAGCTGATT GTCGAGACGA ACGGGCGGCT CACGGTGAAT GATCCGGGCG CACTGCTCAA TGCGTGTCTG GCTGGCTCAG GCGTCGCACA GATGCTGCTG CTCGGCGCCG AGCATTTGAT CCGCCAAGGG CGGCTCGTCA ATCTGTTTCC CGACTGGGCG GATGAGCGCT TCCCGCTATA TGCGTATCAT CCATCAAGGC ATCATGTGCC AGCCCGGACG CGCGCTTTCC TTGACTTCAT TATCGCTTTG ACGAGCATGG GCTAG
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Protein sequence | MRPSTENLSS GISVFAAVVD AGTFAAAAAL MDMSPPGVSR AIARLEKRLK IRLFNRTTRA VSLTEEGRQF YEQVMPHLRG MEEAAAAAAG GGAIVRGKLR INLDPVFSHI LLGAKLDAFM DAHPEIELEF IARDQLGDLI VDGFDLALRF GEPRSSSLIA RKLLDATIVT VASPLYIASR GRPTEPQELG RGIHRCLEFR NPETGKPYHW EFHRKRKKLI VETNGRLTVN DPGALLNACL AGSGVAQMLL LGAEHLIRQG RLVNLFPDWA DERFPLYAYH PSRHHVPART RAFLDFIIAL TSMG
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