| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6311 |
|---|
| Symbol | |
|---|
| ID | 6279050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 2576184 |
|---|
| End bp | 2577482 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642617366 |
|---|
| Product | natural resistance-associated macrophage protein |
|---|
| Protein accession | YP_001890009 |
|---|
| Protein GI | 187920977 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCTCG ACGGAACACC GCTGAAACCC CGCGGCTCGC TTCTAGCGCG CCTCAAGGAA
CATCCGCTTG CGCGGCTCGG ACCTGGCCTC ATCACGGGCG TCGCCGACGA CGATCCGAGT
GGCATCGCCA CCTATTCGCA GGCCGGCGCG CAGTTCGGCC TGAACATGCT GTGGACCATG
CCGCTCGCGT TCCCATTGAT GGCGGCCGTC CAGTCCATGT GCGCGAACCT CGGCCGCGTG
ACCGGCAAGG GTCTGGCCGC GAACATCAAA GATGTGTTTC CGCCCGCCGT GCTCTATGCC
GTGGTGTTGC TACTGCTGGT GGCCAATACG CTGAACATTG CCGCCGACGT AGCGGCCATG
GGTGAAGTCG CGCAACTGGT CATCGGCATC GACCGTCACG TCATGACCGT GTGCTTCGTG
TTCGCCACGC TGCTTCTGCA GATCTTCGTG CCTTACCATC GTTACGTGTT TTTTCTGAAA
TGGCTGACCG TATCGCTACT CGCCTACGCT GCCGTGCTGT TCGTCGTTCA CGTGCCGTGG
AGCGACGTGG CGCTGCGCAC GCTCTGGCCG CATTTCGCCC TGAATGCGAA TGCGGCGGCG
ATGGTAGTCG CCGTGTTCGG CACGACCATC AGCCCCTATC TGTTCTTCTG GCAGGCCTCG
GAAGAAGTCG AGGACCTGCA CGCGCGTACG GACAGCGCGC CGCTCGTCAG CGACGCCCGC
TTCGCGCGCG CGGAACTGCA GCGCATCCGC TGGGACACGT GGAGCGGTAT GCTCTACTCG
GATTTGACCG CCTACTTCAT CATGCTGGCG ACCGCCGTGA CGCTGCACGC GGCCGGTGTG
ACCGACATCA CCACGGCCGC TCAGGCGGCG AGCGCGCTGC GTCCGCTCGC CGGCGACTTC
GCCTATCTGC TGTTCGCACT CGGCATACTC GGCGTGGGAT TCATCGGGGT GCCGGTGCTG
GCCGGCTCCG GCGCCTATGC GTTGGCGGAA GCCATGGGCT GGCCGGAGGG ACTCGAGCGC
AAGCTGCGCG ATGCGCGCGG CTTCTACGGC ATCATCGCCG TGAGCGTGCT GGCTGCGCTG
GCCATCCAGT ATTCGTCGAT CAGTCCGATG AAGGCGCTGT TCTGGAGCGC GGTCATCAAC
GGCGTGGTCG CCGTGCCGCT GATGGCGGTG ATCCTGCTGC TCGTTTCGAA GCGCGCGGTG
ATGGGGGACT TCACCGCGAG CCGGCCGCTC ATCGTGCTCG GCTCGATCGC GACGGTGGTC
ATGGGCTCGG CCGCCGTAAT GATGCTGCTG CCGGCCTAG
|
|---|
| Protein sequence | MDLDGTPLKP RGSLLARLKE HPLARLGPGL ITGVADDDPS GIATYSQAGA QFGLNMLWTM
PLAFPLMAAV QSMCANLGRV TGKGLAANIK DVFPPAVLYA VVLLLLVANT LNIAADVAAM
GEVAQLVIGI DRHVMTVCFV FATLLLQIFV PYHRYVFFLK WLTVSLLAYA AVLFVVHVPW
SDVALRTLWP HFALNANAAA MVVAVFGTTI SPYLFFWQAS EEVEDLHART DSAPLVSDAR
FARAELQRIR WDTWSGMLYS DLTAYFIMLA TAVTLHAAGV TDITTAAQAA SALRPLAGDF
AYLLFALGIL GVGFIGVPVL AGSGAYALAE AMGWPEGLER KLRDARGFYG IIAVSVLAAL
AIQYSSISPM KALFWSAVIN GVVAVPLMAV ILLLVSKRAV MGDFTASRPL IVLGSIATVV
MGSAAVMMLL PA
|
|---|
| |