Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_6282 |
Symbol | |
ID | 6277672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 2540780 |
End bp | 2542069 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642617337 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001889980 |
Protein GI | 187920948 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATAT TAGAAGCCGG TTCCGTCGCC GACCAAACGG CCGTCGGACG ATATAGGTGG ACCATCTGCG CACTCATCTT TTTTGCAACG ACGATCAACT ACATGGATCG TCAGATGCTT GGGCTGCTCG CGCCGCTGCT GCAAAAAGAC ATCGGCTGGA CTCAGGTTCA GTACGCGCAG ACCGTGATGG TGTTCACGGT CGCCTATGCG GTGGGTCTCG CGACGTTCGG CCGTATCGCG GATCGGATCA GCACCAAAGT GGTCTACGGT GGCGCTATGG CGATGTGGAG CCTCGCCGCG ATGCTGCACG CAATAGCGGC GACCGTCCCC GGCTTCGCAG CGGTGCGCGG TTTGCTCGGG TTCGGCGAGG CGGCCAATTT CCCCGTCGCC ATTCGCACCA CGGCGCTATG GTTTCCGAAG AAGGAGCGTG CGCTGGCCAC GGGCCTATGG AACATGGGCG CAACCGTAGG CGGAATCGTT GCGCCCGCAT TCGTACCGAT CGCCGCTGTC ATGTGGGGCT GGCGCGCGAC ATTCATTGCG GGAGGGGCGG CCGGTTTCGT GTGGCTGGCG GTGTGGCTGC TCGTCTACCG TCCTCCGGCG GAGCATGCCT CGGTATCGAA GCGCGAGCTC GACTACATCA ACTCGGATCG GGACGAGAGC GTCGAGCAAC GCGTGAGCTG GCTTTCGGTG CTGAAGTACC GCGAAACGTG GGCGTTCATC TTCGGCAAAC TGCTGACCGA TCCGGTGTGG TGGTTCTATT TGTTCTGGCT GCCTAAATGG CTCAATGAGT CGAGGCACAT CGACATCGCC AATCTTGGGC TGCCGTTGAT CGTCATTTAC ACGATGGCAT CCGTCGGCAG TGTGGCTGGA GGATGGTTGT CGTCCCGGCT GATGCAGCGG TCCCACAAAC CTAATGTCGC ACGCAAGATC GCGATGGGCG TCTGCGCGCT GTGCGTCCTT CCGATTGCCA CACTTTCGCT CTTTCAGAGC CTCTGGTACG CAGTATTCGC TGTCGGGCTC GCCGCGGCGG CTCATCAGGG ATGGTCGGCC AATCTCGTCA CGACGGTCGG CGACGTGTTT CCGCGCCGGA TGGTCGGCAC GGTGGTCGGT ATCGGCGGCG TCGCAGGGAT GATCGGCTCG TTCTTTTACT CGGGCGTTAT CGGCGAGACG TTGCAGCGCA CCGGTCAGTA TTGGGTGCTC TTCGCTGTCG GCGCATCGGC TTATCTGGTC GCGCTCGGCA TCATCCATTT GCTCATGCCG CGCATGACGC CGGTGAAACT CGAGCACTAA
|
Protein sequence | MKILEAGSVA DQTAVGRYRW TICALIFFAT TINYMDRQML GLLAPLLQKD IGWTQVQYAQ TVMVFTVAYA VGLATFGRIA DRISTKVVYG GAMAMWSLAA MLHAIAATVP GFAAVRGLLG FGEAANFPVA IRTTALWFPK KERALATGLW NMGATVGGIV APAFVPIAAV MWGWRATFIA GGAAGFVWLA VWLLVYRPPA EHASVSKREL DYINSDRDES VEQRVSWLSV LKYRETWAFI FGKLLTDPVW WFYLFWLPKW LNESRHIDIA NLGLPLIVIY TMASVGSVAG GWLSSRLMQR SHKPNVARKI AMGVCALCVL PIATLSLFQS LWYAVFAVGL AAAAHQGWSA NLVTTVGDVF PRRMVGTVVG IGGVAGMIGS FFYSGVIGET LQRTGQYWVL FAVGASAYLV ALGIIHLLMP RMTPVKLEH
|
| |