Gene Bphyt_6282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_6282 
Symbol 
ID6277672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp2540780 
End bp2542069 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content61% 
IMG OID642617337 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001889980 
Protein GI187920948 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT TAGAAGCCGG TTCCGTCGCC GACCAAACGG CCGTCGGACG ATATAGGTGG 
ACCATCTGCG CACTCATCTT TTTTGCAACG ACGATCAACT ACATGGATCG TCAGATGCTT
GGGCTGCTCG CGCCGCTGCT GCAAAAAGAC ATCGGCTGGA CTCAGGTTCA GTACGCGCAG
ACCGTGATGG TGTTCACGGT CGCCTATGCG GTGGGTCTCG CGACGTTCGG CCGTATCGCG
GATCGGATCA GCACCAAAGT GGTCTACGGT GGCGCTATGG CGATGTGGAG CCTCGCCGCG
ATGCTGCACG CAATAGCGGC GACCGTCCCC GGCTTCGCAG CGGTGCGCGG TTTGCTCGGG
TTCGGCGAGG CGGCCAATTT CCCCGTCGCC ATTCGCACCA CGGCGCTATG GTTTCCGAAG
AAGGAGCGTG CGCTGGCCAC GGGCCTATGG AACATGGGCG CAACCGTAGG CGGAATCGTT
GCGCCCGCAT TCGTACCGAT CGCCGCTGTC ATGTGGGGCT GGCGCGCGAC ATTCATTGCG
GGAGGGGCGG CCGGTTTCGT GTGGCTGGCG GTGTGGCTGC TCGTCTACCG TCCTCCGGCG
GAGCATGCCT CGGTATCGAA GCGCGAGCTC GACTACATCA ACTCGGATCG GGACGAGAGC
GTCGAGCAAC GCGTGAGCTG GCTTTCGGTG CTGAAGTACC GCGAAACGTG GGCGTTCATC
TTCGGCAAAC TGCTGACCGA TCCGGTGTGG TGGTTCTATT TGTTCTGGCT GCCTAAATGG
CTCAATGAGT CGAGGCACAT CGACATCGCC AATCTTGGGC TGCCGTTGAT CGTCATTTAC
ACGATGGCAT CCGTCGGCAG TGTGGCTGGA GGATGGTTGT CGTCCCGGCT GATGCAGCGG
TCCCACAAAC CTAATGTCGC ACGCAAGATC GCGATGGGCG TCTGCGCGCT GTGCGTCCTT
CCGATTGCCA CACTTTCGCT CTTTCAGAGC CTCTGGTACG CAGTATTCGC TGTCGGGCTC
GCCGCGGCGG CTCATCAGGG ATGGTCGGCC AATCTCGTCA CGACGGTCGG CGACGTGTTT
CCGCGCCGGA TGGTCGGCAC GGTGGTCGGT ATCGGCGGCG TCGCAGGGAT GATCGGCTCG
TTCTTTTACT CGGGCGTTAT CGGCGAGACG TTGCAGCGCA CCGGTCAGTA TTGGGTGCTC
TTCGCTGTCG GCGCATCGGC TTATCTGGTC GCGCTCGGCA TCATCCATTT GCTCATGCCG
CGCATGACGC CGGTGAAACT CGAGCACTAA
 
Protein sequence
MKILEAGSVA DQTAVGRYRW TICALIFFAT TINYMDRQML GLLAPLLQKD IGWTQVQYAQ 
TVMVFTVAYA VGLATFGRIA DRISTKVVYG GAMAMWSLAA MLHAIAATVP GFAAVRGLLG
FGEAANFPVA IRTTALWFPK KERALATGLW NMGATVGGIV APAFVPIAAV MWGWRATFIA
GGAAGFVWLA VWLLVYRPPA EHASVSKREL DYINSDRDES VEQRVSWLSV LKYRETWAFI
FGKLLTDPVW WFYLFWLPKW LNESRHIDIA NLGLPLIVIY TMASVGSVAG GWLSSRLMQR
SHKPNVARKI AMGVCALCVL PIATLSLFQS LWYAVFAVGL AAAAHQGWSA NLVTTVGDVF
PRRMVGTVVG IGGVAGMIGS FFYSGVIGET LQRTGQYWVL FAVGASAYLV ALGIIHLLMP
RMTPVKLEH