| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_6249 |
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| Symbol | |
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| ID | 6278324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2504446 |
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| End bp | 2505516 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642617304 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001889947 |
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| Protein GI | 187920915 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGG GACATACTCT GCAGCGCAGT TCGCCGCACA GTGCCGCGCC GATGCAAACG
AACGCTCTGA CTCGCATCGA CATTGCGCTG TTCAACGGAT TCGCCTTGCC TACGGTCGCC
GCACTCATCG AGATTTTCCA GAGGGCTAAC TCGCTAGTCG CCGCACCGCG CTCGGGCCGC
GCACGTTACG ACGTCTCGCT GCTTTCCGCC GCGGGCGGAC GCATCGCCAG TTCGTCATCG
GTCTTTGTCT GGACCGACGA CGTCCAGTCG CATCGAGGCA CCAACGAGCC ACACCTGTTG
TTCATTGCAG GCGGCGCCGG CGTGCAGCAG GCATGCCGCG ATGAGCGATT GAGCGAGTGG
CTTCGCCGCA GGCATCCGTT CAGCGAGATC GTGCATCCGA TCGCGGAAGG CCAACTGCTG
CTTCAGGCCG CCGGGCTGCC CAGCCGCTAC TGCCCGCTTC TCTATGGAGA CAACGAAGCA
CCCGGCTTGC ATCCGGCGCG GTTGACAGAA GCGCCGGGCG CCGTATCGAC CGCGCTGCGT
ATCGTCGAAG AGGATCTCGG TGCCGATCTC GCGCAGCGGG TTGCCGAATC GATCGCGCCG
CAAACCAGAA CGCCTTTCAG CTCGTCGATC ACGCCCGCCG TGGCGCCCCA GATCAGCGAT
AAGATCCTCG CGTCGGCACG CTGGCTGGAA GCGAACGTCG ACCGGCCCGT CTCGATCGAC
GACGCGGCCC AGGTCGCAGC GATGAGCGAG CGCAACTTCC TGCGCCGCTT CAAGAGCGAG
ATCGGCATGA CGCCCTCCGA CTATCTGCTT CGCGCACGCC TGAATATGAG TTGCCGGATG
CTGGTGGAAT CGCGGCTGCC CGTCGACAAG ATCGCGCGCC GCTGCGGCAT CGGCAGCGGC
GGCCAGTTGT CGAAGTTGTT CAGAAAATAT CTGGAGACGA CGCCGACGGA CTATCGAACG
CGCAACCATG TGGCACAGCA GAAACCAAAC GCACAGGTAC GGGATCAACG GCGCGAGTTC
GATCCAGGTG TTCTGATCGA AGCCGACTAC GCGACTCAAG TCGAAGCGTA A
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| Protein sequence | MDLGHTLQRS SPHSAAPMQT NALTRIDIAL FNGFALPTVA ALIEIFQRAN SLVAAPRSGR
ARYDVSLLSA AGGRIASSSS VFVWTDDVQS HRGTNEPHLL FIAGGAGVQQ ACRDERLSEW
LRRRHPFSEI VHPIAEGQLL LQAAGLPSRY CPLLYGDNEA PGLHPARLTE APGAVSTALR
IVEEDLGADL AQRVAESIAP QTRTPFSSSI TPAVAPQISD KILASARWLE ANVDRPVSID
DAAQVAAMSE RNFLRRFKSE IGMTPSDYLL RARLNMSCRM LVESRLPVDK IARRCGIGSG
GQLSKLFRKY LETTPTDYRT RNHVAQQKPN AQVRDQRREF DPGVLIEADY ATQVEA
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